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GenomicsChIP-Seq of the Sinorhizobium meliloti CRP-like protein Clr in combination with either cAMP or cGMP under different growth conditions
In bacteria, Crp-Fnr superfamily transcription factors mediate 3',5'-cyclic adenosine monophosphate (cAMP) and 3',5'-cyclic guanosine monophosphate (cGMP) signaling. The CRP-like protein Clr of the soil-dwelling and plant-symbiotic α-proteobacterium Sinorhizobium meliloti was previously shown to act...
ORGANISM(S): Sinorhizobium meliloti 
2023-03-23 | E-MTAB-11788 | biostudies-arrayexpress
GenomicsCLR-seq
CLR-seq
PRJEB86038 | ENA
ProteomicsHEK293T RAMP3-miniTurbo CLR proximity interactome
Receptor activity–modifying protein 3 (RAMP3) heterodimerizes with the G protein–coupled receptor (GPCR) calcitonin receptor–like receptor (CLR) to form a functional adrenomedullin (AM) receptor. The goal of this project was to define the proximal interactome of RAMP3 and to determine how this inter...
ORGANISM(S): Homo sapiens (Human) 
2026-09-16 | PXD074263 | Pride
Ap-ms Ramp3 Clr Proximity Miniturbo 
GenomicsIdentification of direct target genes of the Neurospora crassa essential plant biomass deconstruction transcription factors CLR-1, CLR-2 and XLR-1 (ChIP-Seq)
abstract: The plant cell wall is composed of many complex polymers, and its deconstruction requires an equally complex orchestration of a wide array of enzymes. In Neurospora crassa, clr-1, clr-2 and xlr-1 have been identified as the key transcription factors involved in cell wall breakdown. In or...
ORGANISM(S): Neurospora crassa 
2015-09-01 | E-GEOD-68516 | biostudies-arrayexpress
TranscriptomicsIdentification of direct target genes of the Neurospora crassa essential plant biomass deconstruction transcription factors CLR-1, CLR-2 and XLR-1 (RNA-Seq)
abstract: The plant cell wall is composed of many complex polymers, and its deconstruction requires an equally complex orchestration of a wide array of enzymes. In Neurospora crassa, clr-1, clr-2 and xlr-1 have been identified as the key transcription factors involved in cell wall breakdown. In or...
ORGANISM(S): Neurospora crassa 
2015-09-01 | E-GEOD-68514 | biostudies-arrayexpress
GenomicsCLR sequencing of taurine cattle
CLR sequencing of taurine cattle
PRJEB72196 | ENA
GenomicsMorex CLR assembly
SHAPE: Barley cv. Morex CLR assembly
PRJEB39669 | ENA
GenomicsClr-f expression regulates kidney immune and metabolic homeostasis
Clr-f expression regulates kidney immune and metabolic homeostasis
PRJNA816926 | ENA
TranscriptomicsConserved and Essential Transcription Factors for Cellulase Gene Expression in Ascomycete Fungi.
Transcriptional profiling with next-generation sequencing methods refined our understanding of the N. crassa transcriptional response to cellulose and demonstrated that the newly characterized transcription factors clr-1 and clr-2 were required for the bulk of that response including induction all m...
ORGANISM(S): Neurospora crassa OR74A 
2012-04-23 | E-GEOD-35227 | biostudies-arrayexpress
TranscriptomicsClr-f expression regulates kidney immune and metabolic homeostasis
The C-type lectin-related protein, Clr-f, encoded by Clec2h in the mouse NK gene complex (NKC), is a member of a family of immune regulatory lectins that guide immune responses at distinct tissues of the body. Clr-f is highly expressed in the kidney; however, its activity in this organ is unknown. T...
ORGANISM(S): Mus musculus 
2022-03-19 | GSE198814 | GEO
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