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MetabolomicsEnhanced photosynthetic CO2 fixation in mutualistic Chlorella sp. and Mesorhizobium loti co-cultures

It was further confirmed the stimulatory effect of M. loti-derived eCA on microalgae, highlighting key carbon metabolic pathways, including the Calvin cycle, TCA cycle and antioxidant defense response.

2025-01-20 | MTBLS11422 | MetaboLights
TranscriptomicsResponse of Prochlorococcus to varying CO2:O2 ratios
Carbon fixation plays a central role in determining cellular redox poise, increasingly understood to be a key parameter in cyanobacterial physiology. In the cyanobacterium Prochlorococcus--—the most abundant phototroph in the oligotrophic oceans--—the carbon-concentrating mechanism (CCM) is reduced...
ORGANISM(S): Prochlorococcus marinus subsp. pastoris str. CCMP1986 
2015-04-15 | E-GEOD-65684 | biostudies-arrayexpress
GenomicsCO2-fixation bacterial
CO2-fixation bacterial Metagenome
PRJNA757792 | ENA
TranscriptomicsM. sedula transcriptional response under "strict" carbon-limited autotrophy compared to carbon "rich" autotrophy and heterotrophy
Metallosphaera sedula is an extremely thermoacidophilic archaeon that grows heterotrophically on peptides, and chemolithoautotrophically on hydrogen, sulfur, or reduced metals as energy sources. During autotrophic growth, carbon dioxide is incorporated into cellular carbon via the 3-hydroxypropionat...
ORGANISM(S): Metallosphaera sedula DSM 5348 
2013-03-05 | E-GEOD-39944 | biostudies-arrayexpress
ProteomicsFunctional plasticity of HCO3- uptake and CO2 fixation in Cupriavidus necator H16
Uptake and fixation of CO2 are central to strategies for CO2-based biomanufacturing. Cupriavidus necator H16 has emerged as a promising industrial host for this purpose. Despite its prominence, the ability to engineer C. necator inorganic carbon uptake and fixation is underexplored. Here, we test th...
ORGANISM(S): Cupriavidus necator 
2026-01-23 | PXD051976 | Pride
Gas fermentation Dab Rubisco Carbonic anhydrase C1 metabolism Co2 biomanufacturing 
TranscriptomicsComparison of 2 aspen genotypes having similar carbon assimilation rates but different allocation patterns under elevated CO2
• Reference to published study making use of this data: • Cseke LJ, Tsai C-J, Rogers A, Nelsen MP, White HL, Karnosky DF, Podila GK. (2009) Transcriptomic comparison in the leaves of two aspen genotypes having similar carbon assimilation rates but different allocation patterns under elevated CO2. N...
ORGANISM(S): Populus tremuloides 
2009-03-31 | E-GEOD-14881 | biostudies-arrayexpress
GenomicsExceeding Conventional Maximum Carbon Yields via Heterotrophic CO2 Fixation
Exceeding Conventional Maximum Carbon Yields via Heterotrophic CO2 Fixation
PRJNA1395478 | ENA
GenomicsBiological nitrogen fixation maintains C/N balance and photosynthesis at elevated CO2
Biological nitrogen fixation maintains C/N balance and photosynthesis at elevated CO2
PRJNA1020873 | ENA
TranscriptomicsExceeding Conventional Maximum Carbon Yields via Heterotrophic CO2 Fixation
Maximizing carbon yields is crucial in the microbial production of diverse biochemicals. However, microorganisms, particularly heterotrophs, release carbon dioxide (CO2) during the oxidation of organic compounds for energy and building blocks. This metabolism limits the theoretical maximum carbon yi...
ORGANISM(S): Escherichia coli W 
2026-06-18 | GSE315248 | GEO
TranscriptomicsTranscription profiling by microarray of barley mutant (G132) and its wild type (Hordeum vulgare cv. Graphic) under high CO2 concentration
This experiment showed the microarray expression of a barley recessive mutant (G132) and its wild type (Hordeum vulgare cv. Graphic) under high CO2 concentration. The homozygous mutation has a strong pleiotropic nature affecting many aspects of plant. In order to identify target genes of this mutati...
ORGANISM(S): Hordeum vulgare 
2017-02-07 | E-MTAB-4942 | biostudies-arrayexpress
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