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ProteomicsIdentification of Native Cross-links in Bacillus subtilis Spore Coat Proteins
The resistance properties of the bacterial spores are partially due to spore surface proteins, ~30% of which are said to form an insoluble protein fraction. Previous research has also identified a group of spore coat proteins affected by spore maturation, which exhibit an increased level of inter pr...
ORGANISM(S): Bacillus Subtilis (ncbitaxon:1423) 
2021-01-09 | MSV000086681 | MassIVE
TranscriptomicsRNA-Seq Profiling of a Defective Seed Coat Mutation in Glycine max Reveals Differential Expression of Proline Rich and Other Cell Wall Protein Transcripts
The plant cell wall performs a number of essential functions including providing shape to many different cell types and serving as a defense against potential pathogens. The net pattern mutation creates breaks in the seed coat of soybean (Glycine max) because of ruptured cell walls. Using RNA-Seq, w...
ORGANISM(S): Glycine max 
2014-05-16 | E-GEOD-54903 | biostudies-arrayexpress
TranscriptomicsExpression data from transgenic Nicotiana tabacum expressing a variant of coat protein and movement protein from Tobacco mosaic virus
Transgenic expression of viral proteins in natural host plants is a useful simplified system with the potential to understand the individual effect of each viral component. Transgenic expression of movement (MP) and a variant from coat protein (CPT42W) in tobacco, a TMV natural host, produces sever...
ORGANISM(S): Nicotiana tabacum 
2012-12-01 | E-GEOD-37905 | biostudies-arrayexpress
GenomicsBloodstream-specific flagellum attachment proteins can mediate attachment in an insect surface coat environment
BSF FAZ proteins operate in PCF coat environment
PRJEB93833 | ENA
ProteomicsCotL, a new morphogenetic coat protein of Clostridium difficile
The strict anaerobe Clostridium difficile is an important nosocomial enteropathogen that has become the most common cause of antibiotic-associated diarrhea. The oxygen-resistant C. difficile spores play a central role in the infectious cycle, contributing to transmission, infection and recurrence. T...
ORGANISM(S): Peptoclostridium difficile (strain 630) (Clostridium difficile) 
2019-10-16 | PXD010359 | Pride
Spore coat Shotgun proteomics Q exactive hf Clostridium difficile 
TranscriptomicsSEEDSTICK Is a Master Regulator of Development and Metabolism in Arabidopsis Seed Coat
Purpose: The goals of this study are to compare NGS-derived transcriptome profiling (RNA-seq) from the SEEDSTICK mutant in Arabidopsis with a wild type, to unveil the role of this transcription factor in seed development and decipher the impact of this factor in PAs metabolism Methods: Total RNA wa...
ORGANISM(S): Arabidopsis thaliana 
2014-12-17 | E-GEOD-59637 | biostudies-arrayexpress
GenomicsInvestigating the effect of HIV-1 Coat proteins on Primary Bovine Muller glia
Investigating the effect of HIV-1 Coat proteins on Primary Bovine Muller glia
PRJNA864819 | ENA
ProteomicsSpatial distribution of proteins and metabolites in developing wheat grain and their differential regulatory response during the grain filling process
Grain filling and proper grain development are essential biological processes in the plant’s life cycle, which majorly contributes to the final seed yield and quality in all cereal crop. However, very scarcely this knowledge is available in the literature regarding how the different wheat grain comp...
ORGANISM(S): Triticum aestivum (Wheat) 
2022-02-23 | PXD025761 | Pride
Seed coat Triticum aestivum Embryo Proteomics Metabolomics Grain filling Seed development Cavity fluid Wheat Endosperm 
ProteomicsMolecular identification of a BAR domain-containing coat complex for endosomal recycling of transmembrane proteins
Protein trafficking requires coat complexes that couple recognition of sorting motifs in transmembrane cargos with biogenesis of transport carriers. The mechanisms of cargo transport through the endosomal network are poorly understood. Here, we identify a sorting motif for endosomal recycling of car...
ORGANISM(S): Homo sapiens (Human) 
2021-05-28 | PXD014927 | Pride
Snx-bars Endosomes Transmembrane proteins Endocytosis Ci-mpr 
TranscriptomicsTranscription profiling of Arabidopsis protoplasts transfected with TCV or HCRSV and their coat protein mutants
Common transcriptional responses of Arabidopsis thaliana protoplasts transfected with turnip crinkle virus (TCV) , hibiscus chlorotic ringspot virus (HCRSV) and their coat protein mutants.
ORGANISM(S): Arabidopsis thaliana 
2009-07-07 | E-MEXP-1218 | biostudies-arrayexpress
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