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MetabolomicsNatural polymorphism of ZmICE1 contributes to amino acid metabolism that impacts cold tolerance in maize

Cold stress negatively affects maize (Zea mays L.) growth, development and yield. Metabolic adjustments contribute to the adaptation of maize under cold stress. We show here that the transcription factor INDUCER OF CBF EXPRESSION 1 (ZmICE1) plays a prominent role in reprogramming amino a...

2022-10-31 | MTBLS4404 | MetaboLights
TranscriptomicsThe effect of short-term cold treatment in wheat.
One day cold treatment of wheat (Triticum aestivum L.) lines Chinese Spring, Cheyenne and two 5A chromosome substitution lines of Chinese Spring, Chinese Spring(Cheyenne 5A) and Chinese Spring(Spelta 5A)
ORGANISM(S): Triticum aestivum 
2016-10-22 | E-MTAB-3937 | biostudies-arrayexpress
MetabolomicsGlobal untargeted serum metabolomic analyses nominate metabolic pathways responsive to loss of expression of the orphan metallo beta-lactamase, MBLAC1
The C. elegans gene swip-10 encodes an orphan metallo beta-lactamase that genetic studies indicate is vital for limiting neuronal excitability and viability. Sequence analysis indicates that the mammalian gene Mblac1 is the likely ortholog of swip-10, with greatest sequence identity localized...
2019-03-12 | MTBLS650 | MetaboLights
ProteomicsIdentification of drought-cold-responsive proteins in bread wheat using iTRAQ
In the field, abiotic stresses are rarely applied individually. Crops are often subjected to a combination of stresses. To date, no study has been performed on the proteomic investigation of the response of common wheat to a combination of drought and cold stresses. In this study, wheat seedlings ex...
ORGANISM(S): Triticum aestivum (Wheat) 
2018-05-17 | PXD004396 | Pride
Bread wheat Drought and cold responsive proteins Itraq 
TranscriptomicsTranscriptome profiling of low temperature-treated cassava apical shoots reveals dynamic responses of a tropical plant to cold stress
Background: Cassava is an important tropical root crop adapted to a wide range of environmental stimuli such as drought and acid soils. Nevertheless, it is an extremely cold-sensitive tropical species. Thus far, there is limited information about gene regulation and signaling pathways related to the...
ORGANISM(S): Manihot esculenta 
2013-01-17 | E-GEOD-31073 | biostudies-arrayexpress
TranscriptomicsCold stress in sugarcane exp2
Tropical and subtropical plants are generally sensitive to cold and can show appreciable variation in their response to cold stress when exposed to low positive temperatures. Using nylon filter arrays, we analyzed the expression profile of 1536 expressed sequence tags (ESTs) of sugarcane (Saccharum ...
ORGANISM(S): Saccharum sp. 
2010-06-05 | E-GEOD-84 | biostudies-arrayexpress
ProteomicsDIA-based deep proteome and phosphoproteome profiling of early cold response in tomato fruits
Low temperature storage, a widely used technique for extending shelf life of tomato (Solanum lycopersicum) fruits, also induces chilling injury and results in fruit quality loss and consumer dissatisfaction. Numerous studies have been performed to dissect the molecular mechanisms of the cold toleran...
ORGANISM(S): Solanum Lycopersicum 
2024-06-18 | PXD053222 |
TranscriptomicsTranscriptomic analysis of (Group I) Clostridium botulinum ATCC 3502 cold shock response
Profound understanding of the mechanisms foodborne pathogenic bacteria utilize in adaptation to the environmental stress they encounter during food processing and storage is of paramount importance in design of control measures. Chill temperature is a central control measure applied in minimally pro...
ORGANISM(S): Clostridium botulinum 
2014-02-24 | E-GEOD-51465 | biostudies-arrayexpress
ProteomicsIdentification of proteins using iTRAQ and VIGS revealed that three proteins were involved into cold response in bread wheat
iTRAQ-based quantitative proteomic and liquid chromatography tandem mass spectrometry (LC-MS/MS) methods were applied to identify protein spots involved in cold responses in wheat. By comparing the differentially accumulated proteins from the derivatives (UC1110 x PI 610750), as well as the F10 reco...
ORGANISM(S): Triticum aestivum (Wheat) 
2017-08-16 | PXD004427 | Pride
Bread wheat Itraq Cold responsive proteins 
TranscriptomicsCold stress in sugarcane exp1
Tropical and subtropical plants are generally sensitive to cold and can show appreciable variation in their response to cold stress when exposed to low positive temperatures. Using nylon filter arrays, we analyzed the expression profile of 1536 expressed sequence tags (ESTs) of sugarcane (Saccharum ...
ORGANISM(S): Saccharum sp. 
2010-06-05 | E-GEOD-83 | biostudies-arrayexpress
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