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TranscriptomicsDifferentially regulated genes induced in Mycobacterium avium subspecies paratuberculosis by in vitro infection of THP-1 human macrophage cell line
Transcriptional profile of Mycobacterium avium subspecies paratuberculosis in in vitro THP-1 (ATCC TIB-202) cell line infection, comparing bacteria grown in host medium and intracellular bacteria recovered from infected THP-1 cells. Two-condition experiment, MAP-K vs. intracellular MAP-THP-1. Biolog...
ORGANISM(S): Mycobacterium avium subsp. paratuberculosis 
2012-05-31 | E-GEOD-32242 | biostudies-arrayexpress
TranscriptomicsDifferentially regulated genes induced in Mycobacterium avium subspecies paratuberculosis by in vitro acid-nitrosative multi-stress
Transcriptional profile of Mycobacterium avium subspecies paratuberculosis in in vitro acid-nitrosative multistress, comparing untreated control cells and bacteria under multi-stress. Two-condition experiment, MAP-K vs. MAP-ACID-NO treated. Biological replicates: 3 controls, 3 Acid-NO treated, indep...
ORGANISM(S): Mycobacterium avium subsp. paratuberculosis 
2012-05-31 | E-GEOD-32241 | biostudies-arrayexpress
TranscriptomicsDifferentially regulated genes induced by in vitro generated Mycobacterium avium subspecies paratuberculosis cell wall deficient forms
Transcriptional profile of chemically generated Mycobacterium avium subspecies paratuberculosis cell wall deficient forms, comparing untreated control cells (bacillary forms) and cell wall deficient cells. Two-condition experiment, MAP-K vs. MAP-Sph cells. Biological replicates: 3 controls, 3 sphero...
ORGANISM(S): Mycobacterium avium subsp. paratuberculosis 
2012-11-29 | E-GEOD-32235 | biostudies-arrayexpress
TranscriptomicsMycobacterium avium subsp. paratuberculosis gene transcription in simulated phagosomal environment and in human macrophage infection
This SuperSeries is composed of the following subset Series: GSE32241: Differentially regulated genes induced in Mycobacterium avium subspecies paratuberculosis by in vitro acid-nitrosative multi-stress GSE32242: Differentially regulated genes induced in Mycobacterium avium subspecies paratuberculos...
ORGANISM(S): Mycobacterium avium subsp. paratuberculosis 
2012-05-31 | E-GEOD-32243 | biostudies-arrayexpress
TranscriptomicsTranscriptional profile of pathogenic and non-pathogenic in vitro generated mycobacterial cell wall deficient forms
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Mycobacterium avium subsp. paratuberculosis 
2012-11-29 | E-GEOD-32237 | biostudies-arrayexpress
TranscriptomicsDifferentially regulated genes induced by in vitro generated Mycobacterium smegmatis cell wall deficient form
Transcriptional profile of chemically generated Mycobacterium smegmatis cell wall deficient forms, comparing untreated control cells (bacillary forms) and cell wall deficient cells. Two-condition experiment, MSMEG-K vs. MSMEG-Sph cells. Biological replicates: 3 controls, 3 spheroplasts, independentl...
ORGANISM(S): Mycobacterium smegmatis str. MC2 155 
2012-11-29 | E-GEOD-32133 | biostudies-arrayexpress
TranscriptomicsDifferentially regulated genes induced by in vitro generated Mycobacterium tuberculosis cell wall deficient forms
Transcriptional profile of chemically generated Mycobacterium tuberculosis cell wall deficient forms, comparing untreated control cells (bacillary forms) and cell wall deficient cells. Two-condition experiment, MTB-K vs. MTB-Sph cells. Biological replicates: 3 controls, 3 spheroplasts, independently...
ORGANISM(S): Mycobacterium tuberculosis H37Rv 
2012-11-29 | E-GEOD-32236 | biostudies-arrayexpress
TranscriptomicsDifferentially regulated genes induced in Mycobacterium smegmatis by in vitro acid-nitrosative multi-stress
Transcriptional profile of Mycobacterium smegmatis in in vitro acid-nitrosative multistress, comparing untreated control cells and bacteria under multi-stress. Two-condition experiment, MSMEG-K vs. MSMEG-ACID-NO treated. Biological replicates: 3 controls, 3 Acid-NO treated, independently grown and h...
ORGANISM(S): Mycobacterium smegmatis str. MC2 155 
2013-11-05 | E-GEOD-34622 | biostudies-arrayexpress
TranscriptomicsDifferentially regulated genes induced in Mycobacterium tuberculosis by in vitro acid-nitrosative multi-stress
Transcriptional profile of Mycobacterium tuberculosis in in vitro acid-nitrosative multistress, comparing untreated control cells and bacteria under multi-stress. Two-condition experiment, MTB-K vs. MTB-ACID-NO treated. Biological replicates: 3 controls, 3 Acid-NO treated, independently grown and ha...
ORGANISM(S): Mycobacterium tuberculosis H37Rv 
2013-11-05 | E-GEOD-34623 | biostudies-arrayexpress
TranscriptomicsDifferentially regulated genes induced in Mycobacterium by in vitro acid-nitrosative multi-stress
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Mycobacterium smegmatis str. MC2 155 
2013-11-05 | E-GEOD-34624 | biostudies-arrayexpress
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