Cross-validation

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Unknown (13986)
Genomics (458)
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Clinical (4)
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Organisms

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synthetic construct (6)
unidentified (3)
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Glossina morsitans morsitans (1)

Organisms

Homo sapiens (194)
Mus musculus (41)
Zea mays (7)
Rattus norvegicus (6)
Pimephales promelas (5)
human gut metagenome (3)
Eucalyptus grandis x Eucalyptus urophylla (2)
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Canis lupus familiaris (2)
Escherichia coli UTI89 (1)
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human oral metagenome (1)
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Oryza sativa (1)
Sus scrofa (1)
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Escherichia coli (1)
Danio rerio (1)
human vaginal metagenome (1)

Repository

ENA (386)
geo (236)
biostudies-arrayexpress (185)
pride (174)
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Tissue

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Disease

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Cancer (1)
Melanoma (1)
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Malignant neoplasm of retroperitoneum and peritoneum (1)
Gastrointestinal Neoplasms (1)
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Colorectal Neoplasms (1)
Acute leukemia (1)
Adenocarcinoma (1)

Technology Type

Mass Spectrometry (174)
Mass spectrometry (97)
Shotgun proteomics (68)
Mass spectrometry assay (42)
Chemical cross-linking coupled with mass spectrometry proteomics (37)
Bottom-up proteomics (32)
NMR spectroscopy (26)
Affinity purification coupled with mass spectrometry proteomics (24)
Data-dependent acquisition (17)
Data-independent acquisition (12)
Gel-based experiment (11)
SWATH MS (11)
Olink affinity proteomics (5)
SRM/MRM (5)
Top-down proteomics (5)
Affinity proteomics (4)
NMR spectroscopy assay (3)
All-ion fragmentation (2)
Illumina Infinium HumanMethylation450 BeadChips (1)
HDMSE (1)
MSE (1)
Mass spectrometry imaging (1)
Metaproteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (53)
Liquid Chromatography MS - positive - reverse phase (52)
Liquid Chromatography MS - positive - reverse-phase (26)
Liquid Chromatography MS - negative - reverse-phase (26)
Nuclear Magnetic Resonance (NMR) - (19)
Liquid Chromatography MS - positive - hilic (19)
Liquid Chromatography MS - negative - hilic (17)
Gas Chromatography MS - positive (13)
Illumina HiSeq 2500 (2)
NextSeq 500 (2)
Agilent 7890A GC with 5975C inert XL MSD (2)
LTQ (2)
See Description (1)
See Desciption (1)
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Clinical procedure using endoscopic equimpent (1)
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Axon GenePix 4000B scanning hardware (1)
BGISEQ-500 (1)
Illumina HiSeq 4000 (1)
4000 QTRAP (1)
LTQ Orbitrap Velos (1)
Orbitrap Eclipse (1)
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Q Exactive (1)
Q Exactive Plus (1)
Thermo Scientific Velos Pro mass spectrometer modified to enable 351 nm UVPD (1)
Velos elite (1)

Publication Date

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2020 (36)
2011 (34)
2013 (32)
2010 (32)
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2009 (28)
2016 (26)
2019 (24)
2017 (23)
2008 (23)
2014 (21)
2012 (20)
2018 (19)
2007 (15)
2006 (9)
2005 (6)
2003 (1)
2004 (1)

UNIPROT ID/AC

P05198 (1)
O75807 (1)
P35638 (1)
P18848 (1)
Q99941 (1)
P17861 (1)
O75460 (1)
Q9NZJ5 (1)
P18850 (1)

CHEBI ID

CHEBI:15891 (38)
CHEBI:16704 (36)
CHEBI:16919 (35)
CHEBI:16015 (34)
CHEBI:16737 (34)
CHEBI:17191 (34)
CHEBI:30769 (34)
CHEBI:16414 (33)
CHEBI:15354 (33)
CHEBI:15971 (32)
CHEBI:18050 (32)
CHEBI:17568 (32)
CHEBI:7916 (32)
CHEBI:15428 (32)
CHEBI:17295 (32)
CHEBI:17368 (32)
CHEBI:17203 (31)
CHEBI:16467 (31)
CHEBI:17895 (31)
CHEBI:16857 (30)
CHEBI:17268 (29)
CHEBI:16977 (29)
CHEBI:16347 (29)
CHEBI:17750 (28)
CHEBI:32816 (28)
CHEBI:17596 (28)
CHEBI:16750 (27)
CHEBI:16359 (26)
CHEBI:16040 (26)
CHEBI:18132 (25)

Metabolite Name

Creatine (42)
Hypoxanthine (42)
Creatinine (41)
Choline (40)
Taurine (37)
Uridine (36)
Glycerophosphocholine (35)
Uracil (34)
L-Glutamine (34)
L-Proline (33)
Inosine (33)
L-Histidine (31)
Adenosine (30)
Adenine (30)
L-Isoleucine (30)
Betaine (29)
L-Arginine (29)
Histamine (29)
Cytosine (29)
L-Valine (29)
L-Phenylalanine (29)
Riboflavin (27)
Guanosine (27)
L-Carnitine (27)
Sphingosine (26)
L-Threonine (26)
Tyramine (26)
Guanine (26)
Xanthine (26)
L-Tyrosine (26)

First Public Date

2026 (66)
2025 (66)
2014 (66)
2024 (34)
2022 (23)
2023 (21)
2021 (20)
2016 (17)
2017 (14)
2015 (13)
2019 (12)
2018 (12)
2013 (11)
2020 (10)
2010 (1)

Modelling Approach

Ordinary differential equation model (4)
Machine learning (2)
Computational model (2)
Constraint-based model (2)

Study status

Recruiting (2)
Not yet recruiting (1)
Completed (1)

Lab affiliation

1. Department of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada; 2. University of Victoria Genome BC Proteomics Centre, University of Victoria, Victoria, British Columbia, Canada; 3. Gerald Bronfman Department of Oncology, Jewish General Hospital, Montreal, Quebec, Canada; 4. Segal Cancer Proteomics Centre, Lady Davis Institute, Jewish General Hospital, McGill University, Montreal, Quebec, Canada (2)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (2)
Copenhagen University Hospital - Bispebjerg and Frederiksberg Hospital, Copenhagen, Denmark (2)
Drug Discovery Moffitt Cancer Center Tampa, FL, USA (2)
Genomic Medicine Institute, Lerner Research Institute, Cleveland Clinic, 9500 Euclid Avenue, NE-50, Cleveland, Ohio 44195, United States. (2)
Institute of Pharmacology and Structural Biology, CNRS, Toulouse, France (2)
Kubicek lab, Principal Investigator, Head of Molecular Discovery Platform, CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria (2)
Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), Université de Strasbourg,CNRS, IPHC UMR 7178, 67087 Strasbourg,France (2)
Lee Kong Chian School of Medicine, School of Biological Sciences, Nanyang Technological University, Singapore (2)
North Carolina State University (2)
Odense University Hospital, Dept Clinical Biochemistry and Pharmacology, Odense, DK-5000, Denmark (2)
School of Nursing and School of Medicine, Department of Neurology, Johns Hopkins University, Baltimore, MD, United States (2)
., Department of Laboratory Medicine, Medical University of Vienna, 18-20 Währinger Gürtel, 1090 Vienna, Austria (1)
1) Institut de Pharmacologie et de Biologie Structurale (IPBS), Université de Toulouse, CNRS, UPS, Toulouse, France 2) Infrastructure nationale de protéomique, ProFI, FR 2048, Toulouse, France (1)
1. Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. 2. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands. (1)
1. Department of Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany, 2. Wellcome Trust Centre for Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3JR, United Kingdom; (1)
2Proteome Exploration Laboratory, Beckman Institute, California Institute of Technology, Pasadena, CA 91125 (1)
Academia Sinica (1)
Ahmet Hoke M.D., Ph.D. FRCPC Professor, Neurology and Neuroscience Director, Neuromuscular Division Director, Merkin Peripheral Neuropathy and Nerve Regeneration Center Editor-in-Chief, Experimental Neurology Johns Hopkins School of Medicine 855 N. Wolfe St., Rangos 248 Baltimore, MD, 21205 USA (1)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany Wellcome Centre for Cell Biology, University of Edinburgh, Max Born Crescent, Edinburgh, EH9 3BF, UK (1)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany Wellcome Centre for Cell Biology, University of Edinburgh, Max Born Crescent, Edinburgh, EH9 3BF, UK (1)
Biochemistry and Cell Signalling in Nitric Oxide Group Area of Biochemistry and Molecular Biology. Department of Experimental Biology. University of Jaén /University Institute for Research in Olive Oil and Olive Oils (Spain) (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, Utrecht 3584 CH The Netherlands Netherlands Proteomics Center, Padualaan 8, Utrecht 3584 CH, The Netherlands (1)
Byers Eye Institute, Stanford University (1)
CNRS (1)
CNRS, UMR7178, LSMBO, 67087 Strasbourg, FRANCE Université de Strasbourg, IPHC, 25 rue Becquerel, 67087 Strasbourg, FRANCE (1)
COI-NDM (University of Oxford) (1)
Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, UK (1)
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090 Vienna, Austria (1)
CeMM, Research Center for Molecular Medicine of the Austrian Academy of Sciences; Vienna, Austria (1)

Keyword

Polygenic methylation (1)
The community crowd (1)
Colorectal cancer screening (1)
NRS 2002 (1)
Postoperative survival (1)
Nomogram (1)
Multicenter study (1)

IsPrivate

False (11)

Model Flag

Non Kinetic (1)

Submitter Keywords

FAIR-AIML (4)
Machine Learning Model (3)
FROG (2)
Ersilia (1)
Immuno-oncology (1)

Classification

bacteria (5)
viruses (1)
fungi (1)

Modification

0.984016 (1)
14.01565 (1)
15.994915 (1)
19.989829 (1)
28.0313 (1)
3.994915 (1)
57.021464 (1)
Not available (1)

Study type

Transcription profiling by array (135)
ChIP-seq (11)
Transcription profiling by RT-PCR (5)
Comparative genomic hybridization by array (5)
Unknown experiment type (4)
RNA-seq of non coding RNA (4)
Observational (4)
Other (3)
MicroRNA profiling by array (3)
RNA-seq of coding RNA (3)
ChIP-chip by array (2)
DNA-seq (2)
Proteomic profiling by array (2)
ChIP-chip by tiling array (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Genotyping by array (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (2492)
2022 (1666)
2023 (1621)
2024 (1572)
2021 (1458)
2020 (1051)
2019 (821)
2018 (611)
2017 (471)
2026 (399)
2016 (378)
2015 (295)
2014 (275)
2013 (217)
2012 (193)
2011 (159)
2010 (133)
2009 (98)
2008 (85)
2007 (71)
2006 (48)
2005 (27)
2004 (10)
2002 (10)
2003 (8)
2000 (2)

Location

China (3)
Germany (1)

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Predictive chemoproteomics and functional validation reveal Coeae6g mediated insecticide cross-resistance in the malaria vector Anopheles gambiae

This project investigates insecticide resistance mechanisms in Anopheles gambiae using Activity-Based Protein Profiling (ABPP). By targeting serine hydrolases (SHs) with fluorophosphonate (FP) probes and mass spectrometry, we identified COEAE6G as a key enzyme conferring resistance to Pirimiphos-met...

ORGANISM(S): Anopheles gambiae str. PEST

2025-10-17 | PXD060698 | Pride

Proteomics coupled machine learning—innovative approach in geographical origin authentication of green Coffea arabica

The geographical authentication of green specialty coffee is an intriguing phenomenon that is not yet fully resolved. As one of few, this study is focused on the authentication of the geographical origin of green specialty coffee beans from well-known harvesting regions in Central America, South Ame...

ORGANISM(S): Coffea arabica (Arabian coffee)

2025-10-09 | PXD059982 | Pride

Green coffee Linear discriminant analysis Cross-validation Proteome profiling

Cross-Platform Validation of Neurotransmitter Release Impairments in Schizophrenia Patient-Derived NRXN1-Mutant Neurons

PRJNA713833 | ENA

Homo sapiens

Nanopore cross-validation of a Wuchereria bancrofti real-time PCR assay

PRJNA1347464 | ENA

Cross-validation for nonlinear mixed effects models.

Not available

S-EPMC3668859 | biostudies-literature

Consensus features nested cross-validation.

Not available

S-EPMC7776094 | biostudies-literature

Distributional bias compromises leave-one-out cross-validation.

Not available

S-EPMC11177965 | biostudies-literature

Cross-validation in cryo-EM-based structural modeling.

Not available

S-EPMC3670386 | biostudies-literature

Transcription profiling of mouse and human spleen to determine a molecular signature for sepsis

Accuracy of sepsis prediction was obtained using cross-validation of gene expression data from 12 human spleen samples and from 16 mouse spleen samples. For blood studies, classifiers were constructed using data from a training data set of 26 microarrays. The error rate of the classifiers was estima...

ORGANISM(S): Mus musculus

2008-06-14 | E-GEOD-5663 | biostudies-arrayexpress

Step Forward Cross Validation for Bioactivity Prediction: Out of Distribution Validation in Drug Discovery.

Not available

S-EPMC11245006 | biostudies-literature

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15208 Results

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