Cui Fang F - OmicsDI

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Unknown (275)
Proteomics (8)
Metabolomics (4)
Genomics (3)
Transcriptomics (1)

Organisms

Homo sapiens (9)
Vitis vinifera (1)
Mus musculus (1)
Flaveria ramosissima (1)
Rattus norvegicus (1)

Repository

iProX (5)
MetaboLights (4)
EGA (3)
pride (3)
biostudies-arrayexpress (1)

Tissue

Brain (1)
Cell culture (1)
Heart (1)
Kidney (1)
Leaf (1)
Liver (1)
Plant cell (1)

Disease

Disease free (1)

Technology Type

Mass spectrometry (3)
Mass Spectrometry (3)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Data-dependent acquisition (1)
SRM/MRM (1)
Shotgun proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Bruker (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2023 (3)
2026 (2)
2021 (2)
2025 (2)
2015 (1)
2024 (1)
2022 (1)
2017 (1)

CHEBI ID

CHEBI:15354 (3)
CHEBI:17154 (3)
CHEBI:17750 (3)
CHEBI:30769 (3)
CHEBI:15428 (2)
CHEBI:15552 (2)
CHEBI:15554 (2)
CHEBI:15555 (2)
CHEBI:15676 (2)
CHEBI:15756 (2)
CHEBI:15824 (2)
CHEBI:15843 (2)
CHEBI:15891 (2)
CHEBI:15971 (2)
CHEBI:16015 (2)
CHEBI:16196 (2)
CHEBI:16313 (2)
CHEBI:16344 (2)
CHEBI:16347 (2)
CHEBI:16411 (2)
CHEBI:16414 (2)
CHEBI:16418 (2)
CHEBI:16581 (2)
CHEBI:16704 (2)
CHEBI:16737 (2)
CHEBI:16813 (2)
CHEBI:16919 (2)
CHEBI:16985 (2)
CHEBI:16990 (2)
CHEBI:17012 (2)

Metabolite Name

Arachidic acid (2)
Arachidonic acid (2)
Bilirubin (2)
Docosahexaenoic acid (2)
Hippuric acid (2)
Myo-Inositol (2)
Palmitic acid (2)
Prostaglandin D2 (2)
Prostaglandin H2 (2)
Stearic acid (2)
Thymidine (2)
(+/-)-Abscisic acid (1)
(+/-)-CP 47,497-C7-Hydroxy metabolite (1)
(+/-)12(13)-DiHOME (1)
(+/-)18-HEPE (1)
(+/-)9(10)-EpOME (1)
(+/-)9-HpODE (1)
(3R)-4,4-Dimethyl-2-oxotetrahydro-3-furanyl beta-D-glucopyranoside (1)
(3beta,9xi)-3-(beta-D-Glucopyranosyloxy)-14-hydroxycard-20(22)-enolide (1)
(R)-3-Hydroxy myristic acid (1)
(S)-2-Hydroxybutanoicacid (1)
1,1-Dichloroethylene (1)
1,3-dipyridin-3-ylpropane-1,3-dione (1)
1,4-Cyclohexanedicarboxylic acid (1)
1-Methylxanthine (1)
1-Naphthol (1)
1-Palmitoyl-Sn-Glycero-3-Phosphocholine (1)
1-[6-(benzyloxy)-3-(tert-butyl)-2-hydroxyphenyl]ethan-1-one (1)
10-Hydroxydecanoic acid (1)
11(E)-Eicosenoic Acid (1)

Study type

RNA-seq of coding RNA (1)

Release Date

2025 (49)
2022 (43)
2024 (40)
2023 (26)
2020 (23)
2021 (17)
2019 (17)
2018 (14)
2017 (12)
2015 (10)
2026 (6)
2016 (6)
2014 (6)
2013 (2)
2010 (2)
2012 (1)
2011 (1)
2009 (1)

Lab affiliation

CAS Center for Excellence in Molecular Plant Science, Chinese Academic on Science (1)
Children's Hospital of Soochow University, Suzhou (1)
Department of Biological Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA Singapore-MIT Alliance for Research and Technology, Antimicrobial Resistance Interdisciplinary Research Group, Campus for Research Excellence and Technological Enterprise, Singapore 138602, Singapore (1)

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A comprehensive portrait of tissue-, age- and sex-specific DNA modifications in rodents and humans

DNA damage causes genomic instability underlying many diseases, with traditional analytical approaches providing minimal insight into the spectrum of DNA lesions in vivo. Here we used untargeted chromatography-coupled tandem mass spectrometry-based adductomics (LC-MS/MS) to define the landscape of D...

ORGANISM(S): Homo sapiens (Human) Rattus norvegicus (Rat)

2023-09-12 | PXD045311 | Pride

Adductomics Strp mrm

Transcriptomic analysis of Grapevine (cv. Summer Black) leaf at four developmental stages, using the Illumina Platform

The present study was designed to find out the transcriptional system that is connected with the development of leaves and production of metabolites during photosynthesis. We examine the cellular expression by use the up-to-date RNA sequencing expertise to carry out a complete analysis of the transc...

ORGANISM(S): Vitis vinifera

2015-10-29 | E-GEOD-74428 | biostudies-arrayexpress

Genomic and transcriptomic landscapes and evolutionary dynamics of molluscan glycoside hydrolase families with implications for algae-feeding biology.

Not available

S-EPMC7560691 | biostudies-literature

AdBSK1-Mediated Hormone Signaling Regulates Flowering Transition in Actinidia deliciosa ‘Guichang’

Not available

S-EPMC12294449 | biostudies-literature

Genome-wide association study of the candidate genes for grape berry shape-related traits.

Not available

S-EPMC8772106 | biostudies-literature

USP20, a Super-enhancer Regulated Gene, Promotes Acute Myeloid Leukemia Progression through CTNNB1 Deubiquitination

Acute Myeloid Leukemia (AML) is a heterogeneous hematologic malignancy driven by genetic and epigenetic alterations, where super-enhancers (SEs) play key oncogenic roles, representing promising therapeutic targets in AML. Through H3K27ac ChIP-seq profiling of 7 AML cell lines and 13 primary samples,...

ORGANISM(S): Homo sapiens (Human)

2026-03-16 | PXD066445 | Pride

Usp20 super-enhancer aml ctnnb1 as1517499

Crystallographic analysis of the Arabidopsis thaliana BAG5-calmodulin protein complex.

Not available

S-EPMC4498708 | biostudies-literature

Application of data mining for predicting hemodynamics instability during pheochromocytoma surgery.

Not available

S-EPMC7370474 | biostudies-literature

Altered Brain Activity in Depression of Parkinson's Disease: A Meta-Analysis and Validation Study.

Not available

S-EPMC8984499 | biostudies-literature