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Transcriptomicscui- tobacco trichome gene expression
To identify the features of genes expression of leaf trichomes, microarray analysis was performed between trichomes and leaves minus trichomes. RNA extracted from trichomes and leave minus trichomes was used as probes to compare gene expression between the two organs. To ensure the reliability of th...
ORGANISM(S): Nicotiana tabacum 
2011-06-01 | E-MEXP-3148 | biostudies-arrayexpress
Transcriptomicsrat small intestine samples
Experiment description 1. Experimental design 1) Authors, laboratory, and contact: Xue-Lin Cui1, Patricia Soteropoulos2, Peter Tolias2, Ronaldo P. Ferraris1: 1Dept. of Pharmacology and Physiology, UMDNJ-New Jersey Medical School, Newark, NJ 07103-2714, 2Center for Applied Genomics, PHRI, 225 Warre...
ORGANISM(S): Rattus norvegicus 
2010-06-09 | E-GEOD-996 | biostudies-arrayexpress
TranscriptomicsThe Fun30 ATP-dependent nucleosome remodeler promotes resection of DNA double-strand break ends
Chromosomal double-strand breaks (DSBs) are resected by 5M-bM-^@M-^Y-nucleases to form 3M-bM-^@M-^Y single-strand DNA (ssDNA) substrates for binding by homologous recombination and DNA damage checkpoint proteins. Two redundant pathways of extensive resection were described both in cells and in vitro...
ORGANISM(S): Saccharomyces cerevisiae 
2012-10-04 | E-GEOD-38601 | biostudies-arrayexpress
TranscriptomicsA mutation of RNA polymerase β’ subunit (RpoC) converts heterogeneously vancomycin-intermediate S. aureus (hVISA) into ‘slow-VISA’ (sVISA)
Various mutations in the rpoB gene, which encodes the RNA polymerase beta subunit, are associated with increased vancomycin (VAN) resistance in vancomycin-intermediate S. aureus (VISA) and hetero-VISA (hVISA) strains. We reported that rpoB mutations are also linked to the expression of the recently ...
ORGANISM(S): Staphylococcus aureus 
2015-05-08 | E-GEOD-65338 | biostudies-arrayexpress
GenomicsDNA double-strand breaks induced by high NaCl occur predominantly in gene deserts
High concentration of NaCl increases DNA breaks both in cell culture and in vivo. The breaks remain elevated as long as NaCl concentration remains high and are rapidly repaired when the concentration is lowered. Repair of the breaks after NaCl is reduced is accompanied by formation of foci containi...
ORGANISM(S): Mus musculus 
2011-11-21 | E-GEOD-32882 | biostudies-arrayexpress
UnknownGO/MNPs-TEA-CuI in water: a green and efficient catalytic system for multicomponent preparation of highly substituted imidazoles and oxazoles.
Not available
S-EPMC12919339 | biostudies-literature
TranscriptomicsExpression data from the starved first larval stage (L1) C. elegans animals that were incubated in S-basal buffer for 30 hours after bleaching
How animals coordinate gene expression in response to starvation is an outstanding problem closely linked to aging, obesity, and cancer. Newly hatched Caenorhabditis elegans respond to food deprivation by halting development and promoting long-term survival (L1 diapause), thereby providing an excell...
ORGANISM(S): Caenorhabditis elegans 
2014-05-16 | E-GEOD-45651 | biostudies-arrayexpress
UnknownFecal microbiota transplantation for severe enterocolonic fistulizing Crohn's disease.
Not available
S-EPMC3819561 | biostudies-literature
UnknownFecal microbiota transplantation and prednisone for severe eosinophilic gastroenteritis.
Not available
S-EPMC4239532 | biostudies-literature
TranscriptomicsGenome-wide Identification of SHR Direct Targets Using a Custom Agilent Promoter Array
SHR is a key regulator of stem cell renewal and radial patterning in the Arabidopsis root. In previous studies we showed that the SHR is a transcriptional regulator and it regulates gene transcription directly. To fully understand the SHR developmental pathway, we aim to identify its direct target a...
ORGANISM(S): Arabidopsis thaliana 
2010-07-18 | E-GEOD-21338 | biostudies-arrayexpress
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