De Marco P P - OmicsDI

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Unknown (1038)
Transcriptomics (143)
Genomics (33)
Proteomics (27)
Metabolomics (7)
Models (1)
Genomic (1)

Organisms

Homo sapiens (108)
Mus musculus (36)
Oryctolagus cuniculus (9)
Arabidopsis thaliana (5)
Saccharomyces cerevisiae (5)
Lotus japonicus (3)
Malus domestica (2)
Oryctolagus cuniculus cuniculus (2)
Lactiplantibacillus plantarum (1)
Triticum turgidum (1)
Aedes albopictus (1)
Bifidobacterium sp. (1)
Bifidobacterium adolescentis (1)
Ruminococcus flavefaciens FD-1 (1)
Xylella fastidiosa 9a5c (1)
Tuber melanosporum (1)
human gut metagenome (1)
Equus caballus (1)
Trypanosoma cruzi (1)
Vitis vinifera (1)
Anopheles gambiae (1)
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Caenorhabditis elegans (1)
Drosophila melanogaster (1)
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Human herpesvirus 5 strain AD169 (1)
Macaca mulatta (1)
Oryctolagus cuniculus algirus (1)

Repository

biostudies-arrayexpress (160)
pride (22)
EGA (16)
MetaboLights (7)
MassIVE (3)
PanoramaPublic (2)
BioModels (1)
dbGaP (1)

Tissue

Sperm (5)
Placenta (2)
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Brain (1)
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Cell culture (1)
Egg (1)
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Intestine (1)
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Disease

Infertility (4)
Normal (3)
ACUTE MYELOID LEUKEMIA (2)
Disease free (2)
Breast Normal (1)
CHRONIC LYMPHOCYTIC LEUKEMIA (1)
NORMAL (1)
Acute Myeloid Leukemia (1)
Chronic lymphocytic leukemia (1)
Cardiovascular system disease (1)
Male infertility (1)
Prostate adenocarcinoma (1)

Technology Type

Mass Spectrometry (22)
Shotgun proteomics (8)
Bottom-up proteomics (6)
Gel-based experiment (5)
Mass spectrometry (4)
NMR spectroscopy (3)
SWATH MS (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
AB 5500 Genetic Analyzer, Ion Torrent PGM (1)
Illumina HiSeq 1000, Ion Torrent PGM, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina MiSeq (1)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
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HDMSE (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (8)
Illumina HiSeq 1500 (4)
NextSeq 500 (3)
Scanning hardware (2)
Illumina HiSeq 2000 (2)
Illumina HiSeq 4000 (2)
Nuclear Magnetic Resonance (NMR) (2)
Maxwell® RSC 48 Instrument (Promega, AS8500) (1)
Transrectal ultrasound-guided systematic sampling of prostate tissue (TRUS biopsy) (1)
Microarray scanner system (1)
DNA microarray scanner (Agilent #G2565CA) (1)
AB SOLiD 4 System (1)
NextSeq 550 (1)
Illumina HiSeq 2500 (1)
Exactive Plus (1)
Orbitrap Exploris 480 (1)
Q Exactive HF (1)
Bruker (1)
Capillary electrophoresis MS - negative (1)
Capillary electrophoresis MS – positive (1)
Gas Chromatography MS - positive (1)
Gas Chromatography MS - positive - low-polarity (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Q Exactive (1)

Publication Date

2012 (23)
2016 (18)
2015 (18)
2013 (18)
2011 (17)
2014 (16)
2010 (15)
2024 (11)
2020 (11)
2008 (9)
2022 (8)
2021 (7)
2026 (6)
2025 (5)
2019 (5)
2023 (3)
2009 (2)
2005 (1)
2007 (1)
2018 (1)

CHEBI ID

CHEBI:15741 (4)
CHEBI:17750 (4)
CHEBI:24898 (4)
CHEBI:15354 (3)
CHEBI:15428 (3)
CHEBI:16449 (3)
CHEBI:16737 (3)
CHEBI:16919 (3)
CHEBI:17126 (3)
CHEBI:17234 (3)
CHEBI:17822 (3)
CHEBI:18012 (3)
CHEBI:27266 (3)
CHEBI:28300 (3)
CHEBI:14314 (2)
CHEBI:15366 (2)
CHEBI:15603 (2)
CHEBI:15682 (2)
CHEBI:15859 (2)
CHEBI:16015 (2)
CHEBI:16040 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16742 (2)
CHEBI:16811 (2)
CHEBI:16958 (2)
CHEBI:17170 (2)
CHEBI:17287 (2)
CHEBI:17533 (2)
CHEBI:17568 (2)

Metabolite Name

Alanine (2)
Beta-alanine (2)
Betaine (2)
Carnitine (2)
Choline (2)
Creatine (2)
Creatinine (2)
Fructose (2)
Glucose (2)
Glutamine (2)
Glycine (2)
Isoleucine (2)
Isoleucine (2)
L-glutamic acid (2)
L-leucine (2)
Ribose (2)
Serine (2)
Uracil (2)
Valine (2)
(E)-2-Hexenol (1)
(Nω-L-arginino)succinic acid (1)
1,2,3-tripentadecanoylglycerol (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPC (P-16:0/20:4)* (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPE (P-16:0/20:4)* (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2)* (1)
1-(1-enyl-palmitoyl)-2-palmitoyl-GPC (P-16:0/16:0)* (1)
1-(1-enyl-palmitoyl)-GPE (P-16:0)* (1)
1-(1-enyl-stearoyl)-GPE (P-18:0)* (1)
1-Octen-3-ol (1)
1-arachidonoyl-GPI (20:4)* (1)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (89)
ChIP-seq (17)
RNA-seq of coding RNA (14)
MicroRNA profiling by array (10)
Comparative genomic hybridization by array (9)
RNA-seq of coding RNA from single cells (4)
Genotyping by array (3)
Other (3)
ChIP-chip by tiling array (2)
Spatial transcriptomics by high-throughput sequencing (2)
Unknown experiment type (1)
RNA-seq of non coding RNA from single cells (1)
One-color microarray (1)
Human - High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
Methylation profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (147)
2022 (141)
2023 (136)
2021 (136)
2024 (124)
2020 (70)
2019 (55)
2015 (49)
2016 (44)
2017 (43)
2018 (42)
2012 (36)
2013 (35)
2014 (34)
2026 (25)
2011 (25)
2010 (23)
2008 (10)
2009 (9)
2002 (4)
2007 (3)
2001 (2)
2006 (1)
2005 (1)
2004 (1)
1999 (1)

Lab affiliation

Instituto de Ciencia y Tecnologia Animal Universitat Politècnica de València Valencia, Spain (2)
Instituto de Ciencia y Tecnología Animal, Universidad Politècnica de València, Valencia, Spain (2)
Centro Nacional de Investigaciones Cardiovasculares, 28029, Madrid, Spain (1)
Centro de Investigación y Tecnología Animal-Instituto Valenciano de Investigaciones Agrarias (CITA-IVIA), Polígono La Esperanza nº 100, 12400 Segorbe, Castellón, Spain. (1)
Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Faculty of Medicine, Nursing and Health Sciences, Monash University; Clayton, Victoria, 3800, Australia (1)
Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Faculty of Medicine, Nursing and Health Sciences, Monash University; Clayton, Victoria, 3800, Australia. (1)
Department of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, 233 S 10th Street, BLSB 826, Philadelphia, PA, 19104 (1)
Department of Experimental and Clinical Medicine, University of Catanzaro, Italy. (1)
Department of Pharmacy, "G. d'Annunzio" University of Chieti-Pescara (1)
Infection and Immunity Program Biomedicine Discovery Institute Monash University 23 Innovation Walk Clayton VIC 3800 Australia (1)
Institute of Bioengineering, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, Zhejiang, China, 310027 (1)
Instituto de Ciencia y Tecnologia Animal Iniversitat Politecnica de Valencia (UPV) Valencia, Spain (1)
Instituto de Ciencia y Tecnologia Animal Universitat Politècnica de València (UPV) Valencia (Spain) (1)
Laboratory of Experimental Hematology, Vaccine and Infectious Disease Institute (Vaxinfectio), University of Antwerp, 2610 Wilrijk, Belgium (1)
Laboratory of Immunoinflammation, Department of Genetics and Evolution, Microbiology, and Immunology, Institute of Biology, University of Campinas, Brazil (1)
Proteomics Platform CIC bioGUNE Bizkaia Tech. Park Build. 800 48160 Derio (Spain) (1)
Proteomics Platform CIDC bioGUNE Bizkaia Tech. Park Build. 800 48160 Derio 48160 Spain (1)
School of Veterinary Science, The University of Queensland, Brisbane, Queensland, Australia (1)
Universidad Simón Bolívar, Facultad de Ciencias Básicas y Biomédicas, Centro de Investigaciones en Ciencias de la Vida, Barranquilla, Colombia (1)
University of Catanzaro, Viale Europa, Italy (1)

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Manifestations cutanees au cours l’epidemie de COVID-19 : etude COVID-Skin de la Societe francaise de dermatologie

Not available

S-EPMC7688280 | biostudies-literature

Supramolecular One-Dimensional n/p-Nanofibers.

Not available

S-EPMC5378913 | biostudies-literature

Expression data of the splenocytes from mice at 6th of Plasmodium chabaudi infection.

During malaria infection is observed a robust immune response culminating on release of inflammatory mediators. This exacerbated immune response is involved in malaria symptoms and mortality. There are evidences that this response is mediated by innate immunity where pattern recognition receptors ha...

ORGANISM(S): Mus musculus

2012-01-13 | E-GEOD-35083 | biostudies-arrayexpress

In-situ metabolome of Ramalina farinacea from thalli collected across six European regions during winter and summer

Samples of the model lichen Ramalina farinacea were collected from six sites (countries) across a geographical gradient in Europe: Czech Republic, Estonia, Finland, Norway, Spain, and Sweden. Sampling was carried out in winter (January-March 2023) and summer (June-July 2023), with six individuals co...

2026-07-22 | MTBLS14580 | MetaboLights

Clinicopathological findings and risk factors associated with Cytauxzoon spp. infection in cats: A case-control study (2008-2021).

Not available

S-EPMC9685617 | biostudies-literature

Vitrification of embryos modifies foetal placenta proteome. MALDI TOF/TOF

Very limited information about the post-implantatory effects of vitrification has been published till now. In a previous study, we observed that vitrification procedure introduced transcriptomic and proteomic modifications in the rabbit foetal placenta at the middle of gestation. In addition, a redu...

ORGANISM(S): Oryctolagus cuniculus cuniculus

2015-07-17 | PXD001840 | Pride

ILVES: Accurate and Efficient Bond Length and Angle Constraints in Molecular Dynamics.

Not available

S-EPMC12461920 | biostudies-literature

Spatial and Temporal Phylogeny of Border Disease Virus in Pyrenean Chamois (Rupicapra p. pyrenaica).

Not available

S-EPMC5199066 | biostudies-literature

COMPARISON OF RABBIT SEMINAL PLASMA PROTEOME BETWEEN GENETIC LINES AND SEASONS

Seminal plasma contributes to the safe environment for sperm maturation, sperm viability and fertilization in mammals (Kumar 2013). Moreover, seminal plasma is a promising source for the study of potential reproductive biomarkers, because it is a complex mixture of secretions from testis, epididymis...

ORGANISM(S): Oryctolagus cuniculus (Rabbit)

2018-01-04 | PXD006308 | Pride

Season Genetic line Seminal plasma Rabbit Proteome Lc-ms/ms

A Cross-Platform Metabolomics Comparison Identifies Serum Metabolite Signatures of Liver Fibrosis Progression in Chronic Hepatitis C Patients

Metabolomics offers new insights into disease mechanisms that is enhanced when adopting orthogonal instrumental platforms to expand metabolome coverage, while also reducing false discoveries by independent replication. Herein, we report the first inter-method comparison when using multisegment injec...

2023-08-22 | MTBLS3111 | MetaboLights

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