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Transcriptomicshpr1 sumoylation mutant
To gain insight into the impact of THO complex sumoylation on gene expression in yeast S. cerevisiae, total RNAs were extracted from wt and hpr1-KR cells and transcriptome profiles were analyzed by Agilent microarrays. The hpr1 K-R mutant is a version of the hpr1 THO subunit in which lysines 60-65 w...
ORGANISM(S): Saccharomyces cerevisiae 
2014-01-25 | E-MTAB-2138 | biostudies-arrayexpress
TranscriptomicsCharacterization of yap7 in Saccharomyces cerevisiae and the human pathogen Candida glabrata
This study aimed at characterizing the targets of the bZIP transcription factor Yap7 in two yeast species: Saccharomyces cerevisiae and the human pathogen Candida glabrata. Transcriptome analyses were thus conducted in wild type and yap7 knock out strains using Agilent microarrays.
ORGANISM(S): Saccharomyces cerevisiae 
2014-10-01 | E-MTAB-2653 | biostudies-arrayexpress
TranscriptomicsChromatin immunoprecipitation to identify gene-nuclear pore association in wild type and THO mutants of yeast
This work aimed at analysing the genomic loci that are aberrantly docked to the nucleopore in mutants of the THO complex
ORGANISM(S): Saccharomyces cerevisiae 
2008-08-15 | E-TABM-535 | biostudies-arrayexpress
TranscriptomicsIdentification of the mRNAs interacting with the Nup59 nucleoporin using RNA-IP and microarrays in budding yeast
To specifically explore such mRNA localization events, we immunopurified the entire Nuclear Pore Complex scaffold using Nup59 as a bait and systematically analyzed all co-isolating mRNAs using Agilent microarrays in the budding yeast Saccharomyces cerevisiae. A mock IP was performed as a control exp...
ORGANISM(S): Saccharomyces cerevisiae 
2021-03-31 | E-MTAB-9521 | biostudies-arrayexpress
TranscriptomicsSelenite treatment of a Saccharomyces cerevisiae wild type strain.
In the frame of a multispecies project, Saccharomyces cerevisiae cells were treated with 10 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological rep...
ORGANISM(S): Saccharomyces cerevisiae 
2018-11-12 | E-MTAB-7022 | biostudies-arrayexpress
TranscriptomicsSelenite treatment of a Lachancea thermotolerans wild type strain
In the frame of a multispecies project, Lachancea thermotolerans cells were treated with 5 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological repl...
ORGANISM(S): Lachancea thermotolerans 
2018-11-12 | E-MTAB-7045 | biostudies-arrayexpress
TranscriptomicsSelenite treatment of a Candida albicans wild type strain
In the frame of a multispecies project, Candida albicans cells were treated with 0.5 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replicates...
ORGANISM(S): Candida albicans 
2018-11-12 | E-MTAB-7053 | biostudies-arrayexpress
TranscriptomicsSelenite treatment of a Lachancea kluyveri wild type strain
In the frame of a multispecies project, Lachancea kluyveri cells were treated with 5 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replicates...
ORGANISM(S): Lachancea kluyveri 
2018-11-12 | E-MTAB-7046 | biostudies-arrayexpress
TranscriptomicsTranscriptome analyses of the response of C. glabrata wild type cells to iron excess, salt excess, cadmium treatment and iron starvation
A Candida glabrata wild type strain (HTL, as described in Schwartzmuller et al., PLoS Pathog. 2014 Jun 19;10(6):e1004211) was submitted to various stress conditions (iron excess, salt excess, cadmium treatment and iron starvation (BPS treatment). The cells were collected 20 and 40 minutes after the ...
ORGANISM(S): [Candida] glabrata 
2018-11-12 | E-MTAB-7043 | biostudies-arrayexpress
TranscriptomicsSelenite treatment of a Kluyveromyces lactis wild type strain
In the frame of a multispecies project, Kluyveromyces lactis cells were treated with 0.5 mM sodium selenite. Cells were collected 10, 20, 30, 40, 50, 60, 70 and 80 minutes after the treatment and their transcriptomes were compared to those of mock-treated cultures. Four independent biological replic...
ORGANISM(S): Kluyveromyces lactis 
2018-11-12 | E-MTAB-7047 | biostudies-arrayexpress
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