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ProteomicsIdentification of dI-binding proteins
The dI-binding proteins were enriched and analysed by LC-MS/MS.
ORGANISM(S): Homo sapiens (Human) 
2023-02-03 | PXD033424 | Pride
Lc-ms/ms Di-binding proteins 
Proteomicsc-di-GMP-induced conformational dynamics of the c-di-GMP-binding protein A (CdbA) from Myxococcus xanthus
The second messenger c-di-GMP has important functions in response to changing environmental and cellular cues in bacteria. Here, we report the identification of CdbA, a DNA binding protein of the ribbon-helix-helix family in Myxococcus xanthus, and show that it binds c-di-GMP in vitro. CdbA is essen...
ORGANISM(S): Myxococcus xanthus DK 1622 
2020-04-16 | PXD018028 | Pride
C-di-gmp Plgs Hdx-ms Dynamx 
UnknownDiversity of Cyclic Di-GMP-Binding Proteins and Mechanisms.
Not available
S-EPMC4686193 | biostudies-literature
UnknownSystematic Identification of Cyclic-di-GMP Binding Proteins in Vibrio cholerae Reveals a Novel Class of Cyclic-di-GMP-Binding ATPases Associated with Type II Secretion Systems.
Not available
S-EPMC4624772 | biostudies-literature
GenomicsProteo-Genomic Characterization and Mapping of Nucleosomes Decoded by Brd and HP1 Proteins (Chip-Seq data)
Background: Histone post-translational modifications (PTMs) constitute a branch of epigenetic mechanisms that can control the expression of eukaryotic genes in a heritable manner. Recent studies have identified several PTM-binding proteins containing diverse specialized domains whose recognition of ...
ORGANISM(S): Homo sapiens 
2012-07-31 | E-GEOD-39579 | biostudies-arrayexpress
UnknownApplication of Synthetic Peptide Arrays To Uncover Cyclic Di-GMP Binding Motifs.
Not available
S-EPMC4686192 | biostudies-literature
UnknownCyclic di-AMP impairs potassium uptake mediated by a cyclic di-AMP binding protein in Streptococcus pneumoniae.
Not available
S-EPMC3911161 | biostudies-literature
UnknownNucleotide binding by the widespread high-affinity cyclic di-GMP receptor MshEN domain.
Not available
S-EPMC5013675 | biostudies-literature
TranscriptomicsGene expression profiling in the human pathogenic dermatophyte Trichophyton rubrum during growth on proteins
Dermatophytes are highly specialized filamentous fungi which cause the majority of superficial mycoses in humans and animals. The high secreted proteolytic activity of these microorganisms during growth on proteins is assumed to be linked with their particular ability to exclusively infect keratiniz...
ORGANISM(S): Trichophyton rubrum 
2008-12-30 | E-GEOD-11711 | biostudies-arrayexpress
UnknownCyclic di-AMP, a second messenger of primary importance: tertiary structures and binding mechanisms.
Not available
S-EPMC7102992 | biostudies-literature
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