Di-methylation - OmicsDI

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Lab affiliation

The Key Laboratory of Molecular Biology of Infectious Diseases designated by the Chinese Ministry of Education, Chongqing Medical University, Chongqing, China. (5)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics & Cognitive Research, Neuroscience Campus Amsterdam, VU University, Amsterdam, The Netherlands (5)
Head of the Curie Institute Mass Spectrometry Platform (3)
UMR 7367 CNRS-UL IMoPA Biopôle de l'Université de Lorraine Campus Brabois-Santé 9 avenue de la forêt de Haye 54505 Vandoeuvre-les-Nancy FRANCE (2)
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Research Institute of Molecular Pathology, Vienna BioCenter, Vienna, Austria (2)
Dalian Institute of Chemical Physics, CAS (2)
Epigenetics Program, Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania (2)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (2)
Raymond H. Wittcoff Distinguished Professor and Head Department of Biochemistry and Molecular Biophysics Washington University School of Medicine St. Louis, MO 63110 United States of America (1)
Mass Spectrometry Core, Van Andel Institute, Grand Rapids, MI, USA (1)
Department of Immunotechnology, Lund University, Medicon Village, Lund, Sweden (1)
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Division of Biotechnology, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China (1)
Centre for Bioinformatics and Computational Biology, University of Stellenbosch, South Africa (1)
Department of Chemistry, Yale University, New Haven, CT, USA (1)
Institute of Functional Epigenetics, Helmholtz Zentrum München, Germany (1)
dapengzhang0@yeah.net (1)
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Mork Family Dept of Chem Eng and Mat Sci (1)
Biology department, Stanford, USA (1)
Group Leader School of Biomolecular and Biomedical Science Conway Institute, University College Dublin, Belfield, Dublin 4, IRELAND (1)
Knight Cardiovascular Institute Oregon Health & Science University 3181 SW Sam Jackson Park Road Portland, Oregon 97239, USA (1)
Broad Institute, Dana Farber Cancer Institute (1)
733 N. Broadway Miller Research Building room 527 Johns Hopkins University Baltimore, MD 21205 (1)
SRI for Systems Biology and Medicine (1)
IMBA - Institute of Molecular Biotechnology GmbH Dr. Bohr-Gasse 3 1030 Vienna Austria (1)
University of New South Wales (1)
Proteomics Program, Faculty of Health and Medical Sciences, Novo Nordisk Foundation Center for Protein Research (NNF-CPR), University of Copenhagen, Denmark (1)
Institute of Oncology Research (IOR), Università della Svizzera Italiana (USI), 6500 Bellinzona, Switzerland (1)

Location

Italy (1)

Keyword

Temozolomide (1)

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Deuterium-free, Three-plexed Peptide Di-Ethylation for Highly Accurate Quantitative Proteomics

The deuterium, frequently used stable isotope in isotopic labeling for quantitative proteomics, could deteriorate the accuracy and precision of proteome quantification owing to the retention time shift of deuterated peptides from the hydrogenated counterpart. Herein, we introduce a novel three-plexe...

ORGANISM(S): Homo sapiens (Human)

2019-01-17 | PXD012117 | Pride

Biodiversity library of protein di-methylation in bacteria

Phyloproteomics analysis of di-methylation sites across 49 bacterial strains from 48 species; 1~3 biological replicates. Samples were digested with trypsin, then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS processing pipeline.

ORGANISM(S): Bacillus Subtilis (ncbitaxon:1423) Bacteroides Thetaiotaomicron Vpi-5482 (ncbitaxon:226186) Bacteroides Fragilis 638r (ncbitaxon:862962) Myxococcus Xanthus Dz2 (ncbitaxon:1198133) Rhodopseudomonas Palustris (ncbitaxon:1076)

2025-04-23 | MSV000097706 | MassIVE

Histone H3 lysine 9 di-methylation as an epigenetic signature of the interferon response (sequencing)

Effective anti-viral immunity depends on the ability of infected cells or cells triggered with virus-derived nucleic acids to produce type I interferon (IFN), which activates transcription of numerous antiviral genes. However, disproportionately strong or chronic IFN expression is a common cause of ...

ORGANISM(S): Mus musculus

2012-03-02 | E-GEOD-22102 | biostudies-arrayexpress

Regulation and function of H3K36 di-methylation by the trithorax-group protein complex AMC

PRJNA422516 | ENA

Histone H3 lysine 9 di-methylation as an epigenetic signature of the interferon response

This SuperSeries is composed of the following subset Series: GSE22102: Histone H3 lysine 9 di-methylation as an epigenetic signature of the interferon response (sequencing) GSE24774: Histone H3 lysine 9 di-methylation as an epigenetic signature of the interferon response (WT and G9a deficient DCs) G...

ORGANISM(S): Mus musculus

2012-03-02 | E-GEOD-24826 | biostudies-arrayexpress

H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation [RNA-seq of mESC]

PRJNA1262337 | ENA

H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation [ChIP-seq of mESC]

PRJNA1393038 | ENA

H3K9 acetylation and di-methylation changes in HL-60 cells following treatment with different compounds

PRJNA511993 | ENA

H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation [RNA-seq of early embryo]

PRJNA1262345 | ENA

H3K9 di-methylation dynamics underlies mouse minor zygotic genome activation [CATCH-seq of early embryo]

PRJNA1262338 | ENA