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MetabolomicsHabitual Coffee Intake Shapes the Gut Microbiome and Modifies Host Physiology and Cognition

Coffee influences multiple physiological processes, including gut function, stress, cognition, and the microbiome. However, the mechanisms underlying these effects remain poorly understood. In this study, we examined coffee’s impact on the microbiota–gut–brain axis—a bidirectional communication p...

2026-04-07 | MTBLS13494 | MetaboLights
ProteomicsDigestive physiology in the carnivorous rainbow plant Byblis filifolia Planch
•Carnivorous plants from the order Caryophyllales co-opted plant phytohormones from the group of jasmonates for regulation of digestive enzyme activities. But not all genera of carnivorous plants are evenly explored and the digestive physiology of the Australian carnivorous rainbow plants of the gen...
ORGANISM(S): Byblis filifolia 
2025-05-20 | PXD060459 | Pride
Carnivorous plant Sundew Jasmonic acid Drosera Digestive enzyme Byblis 21 phytohormones 
TranscriptomicsMytilus galloprovincialis: differences between male and female gene expression patterns in the digestive gland tissue
Direct comparison of the transcriptional patterns between male and female in the digestive gland of a natural population of the marine mussel Mytilus galloprovincialis sampled in the Bizerta Lagoon, Tunisia, across November 2007 -February March 2008 (four stages, winter peak). Background: Seasonal e...
ORGANISM(S): Mytilus galloprovincialis 
2011-06-06 | E-GEOD-23051 | biostudies-arrayexpress
TranscriptomicsMussel (Mytilus galloprovincialis) digestive gland tissue: gene expression profiles across an annual cycle
Transcriptional profiling of natural population of mussels (Mytilus galloprovincialis) -digestive gland tissue- comparing female individuals sampled in the Bizerta Lagoon, Tunisia, across May 2007 - April 2008. Background: Seasonal environmental changes may affect the physiology of Mytilus gallopro...
ORGANISM(S): Mytilus galloprovincialis 
2011-06-06 | E-GEOD-22915 | biostudies-arrayexpress
TranscriptomicsMytilus galloprovincialis: temporal expression analysis of digestive gland and mantle
This SuperSeries is composed of the following subset Series: GSE22915: Mussel (Mytilus galloprovincialis) digestive gland tissue: gene expression profiles across an annual cycle GSE23049: Mytilus galloprovincialis: development of female gonads GSE23050: Mytilus galloprovincialis: development of male...
ORGANISM(S): Mytilus galloprovincialis 
2011-07-11 | E-GEOD-23052 | biostudies-arrayexpress
MetabolomicsHabitual Coffee Intake Shapes the Gut Microbiome and Modifies Host Physiology and Cognition: double-blind, randomised, parallel design

Coffee influences multiple physiological processes, including gut function, stress, cognition, and the microbiome. However, the mechanisms underlying these effects remain poorly understood. In this study, we examined coffee’s impact on the microbiota–gut–brain axis—a bidirectional communication p...

2026-03-26 | MTBLS13401 | MetaboLights
MetabolomicsIntegrated metabolomic and microbiomic analysis of the effects of dietary Candida utilis replacement of fishmeal on the growth, physiology, and intestinal microbiota of southern catfish (Silurus meridionalis)

Liver samples of southern catfish were sent to Majorbio Bio-pharm Technology Co., Ltd. for untargeted metabolomic sequencing referring to previous study [27]. Grinding beads were added to the liver samples, and metabolites were extracted via low-tempe...

2025-11-19 | MTBLS13346 | MetaboLights
TranscriptomicsXenobiotics shape the physiology and gene expression of the active human gut microbiome
The human gut is colonized by trillions of microorganisms that influence human health and disease through the metabolism of xenobiotics, including therapeutic drugs and antibiotics. The diversity and metabolic potential of the human gut microbiome have been extensively characterized, but it remains ...
ORGANISM(S): human gut metagenome 
2012-10-30 | E-GEOD-38151 | biostudies-arrayexpress
UnknownUse of luciferase genes as biosensors to study bacterial physiology in the digestive tract.
Not available
S-EPMC106452 | biostudies-literature
TranscriptomicsDifferential gene expression analysis in adult rotation-resistant (RR) and wild-type (WT) western corn rootworm digestive tracts
The western corn rootworm (WCR, Diabrotica virgifera virgifera LeConte) is an important pest of corn (Zea mays) in the US. Annual crop rotation between corn and soybean (Glycine max) disrupts the corn-dependent WCR lifecycle and was widely adopted to manage WCR. However, this strategy selected for ...
ORGANISM(S): Diabrotica virgifera virgifera 
2015-11-23 | E-GEOD-62480 | biostudies-arrayexpress
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