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TranscriptomicsEffect of TCDD Exposure on purified splenic CD8 T cells
8-12 week, female C57BL/6 mice were injected with 10 µg/kg TCDD or solvent control. CD8+ T cells from spleen were FACS purified and submitted to transcription profiling Keywords: TCDD, AHR, Immunosupression peripheral T cells, CD8 T cells, Toxicogenomics For each group 4 female C57BL/6 mice were tre...
ORGANISM(S): Mus musculus 
2008-11-25 | E-GEOD-10093 | biostudies-arrayexpress
ProteomicsQuantitative proteomics profiling of protein kinase A substrates - Jurkat clone E6.1
Here we evaluate and explore a peptide-centric antibody generated to selectively enrich peptides containing the cAMP-dependent protein kinase A (PKA) consensus motif. This targeted phospho-proteomic strategy is used to profile temporal quantitative changes of protein PKA substrates in Jurkat T-lymph...
ORGANISM(S): Homo sapiens (Human) 
2013-07-25 | PXD000148 | Pride
Targeted approach Dimethyl lableing Immunoprecipiation Phosphoproteomics Lc-msms 
TranscriptomicsOryza sativa-Magnaporthe grisea interaction
5 leaves old rice plantlets were infected with Magnaporthe grisea spores and zero, two hours and twenty four houres after infection samples were collected control and 2 hour were mixed and hybridized with chip besides control and twenty four hours were mixed and hybridized with another chip. Both ch...
ORGANISM(S): Oryza sativa 
2014-01-31 | E-GEOD-50454 | biostudies-arrayexpress
TranscriptomicsDiscovery of immediate YAP target genes with inducible form of YAP
Microarray analyses with cells/tissues overexpressing YAP have revealed many transcription targets of YAP (Dong et al, 2007; Zhao et al, 2008). However, as YAP induces transformation of non-cancerous cells, we thought many of known targets of YAP may be indirect consequence of transforming property ...
ORGANISM(S): Homo sapiens 
2015-11-23 | E-GEOD-60579 | biostudies-arrayexpress
TranscriptomicsMicroarray analysis of leaf rust-induced bread wheat genes
One week old bread wheat plantlets were artifically infected with Puccinia triticinae (the causal organism of wheat leaf rust) and samples were collected after one week from infection. Samples were collected after one week from infection, non infected as well. Two loacl varities were used MISR 1 and...
ORGANISM(S): Triticum aestivum 
2014-07-20 | E-GEOD-55297 | biostudies-arrayexpress
TranscriptomicsmRNA expression profiling in mouse bronchoalveolar stem cells (BASC)
We performed miRNA and mRNA profiling in BASC cells and c-Myc depleted BASC cells. We built potential miRNA-mRNA interaction networks specific to c-Myc regulation in BASCs Replicated profilling for both BASC cells and c-Myc depleted BASC cells.
ORGANISM(S): Mus musculus 
2012-01-26 | E-GEOD-30323 | biostudies-arrayexpress
TranscriptomicsmRNA and miRNA expression profiling in mouse bronchoalveolar stem cells (BASC)
This SuperSeries is composed of the following subset Series: GSE30323: mRNA expression profiling in mouse bronchoalveolar stem cells (BASC) GSE30435: MicroRNA expression profile in mouse bronchoalveolar stem cells (BASC) Refer to individual Series
ORGANISM(S): Mus musculus 
2012-01-26 | E-GEOD-30437 | biostudies-arrayexpress
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