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GenomicsLandscape of H3K4me3 in human CD19 cells
Chromatin immunoprecipiation of H3K4me3 of isolated B cells from healthy human donors and LCLs and RNA-sequencing of extracted RNAs
ORGANISM(S): Homo sapiens 
2018-10-04 | GSE106851 | GEO
GenomicsChIP-seq of LNCaP cells for AR
Chromatin immunoprecipiation is used to infer transcription factor activity. In this project, we performed ChIP-seq in LNCaP prostate cancer cells with antibodies against the androgen receptor to identify its binding sites under hormone-replete conditions.
ORGANISM(S): Homo sapiens 
2025-08-21 | GSE304127 | GEO
GenomicsDevelopmental Regulation and Individual Differences of Neuronal Epigenomes in the Prefrontal Cortex
We report global distribution of trimethylated Histone H3 Lysine 4 (H3K4me3) in human prefrontal cortex neurons at different ages Neuronal nuclei from human prefrontal cortex were isolated by FACS. Regions marked by H3K4me3 were identified by chromatin immunoprecipiation followed by deep sequencing.
ORGANISM(S): Homo sapiens 
2010-04-20 | E-GEOD-21172 | biostudies-arrayexpress
GenomicsThe response to PAM3CSK4 (PAM3) of bone marrow derived macrophages treated with 25-hydroxycholesterol (ChIP-Seq).
Bone marrow derived macrophages from C57BL/6 or Ch25h-/- mice (female) were left untreated or treated with 25-hydroxycholesterol for 18 hours and then were left unstimulated or stimulated with PAM3CSK4 for 18 hours. Chromatin was isolated and immunoprecipiation performed for acetyl-H4.
ORGANISM(S): Mus musculus 
2024-04-03 | GSE201131 | GEO
TranscriptomicsRNA immunoprecipiation identifies novel targets of DAZL in human fetal ovary
We identified 429 potential RNA targets of DAZL in the human fetal ovary (padj<0.01), with function in synaptonemal complex formation and recombination (SYCP1, SYCP3, HORMAD1, TRIP13, TEX11), structural maintenance of chromosomes/cohesin formation and spindle assembly checkpoint (SMC1B, RAD21L, MAD2...
ORGANISM(S): Homo sapiens 
2017-01-10 | GSE81524 | GEO
ProteomicsProteomic analysis of FBXL6 interacting proteome
FBXL6 is a E3 ubiquitin ligase that we suspected to be involved in mitochondrial functions. We have investigated the specific interactome of this E3 by transfecting HEK cells with Flagged-FBXL6, or with b-gal (control). After flag immunoprecipiation, specific interacting proteome was identified by m...
ORGANISM(S): Homo sapiens (Human) 
2023-09-25 | PXD037248 | Pride
Quantitative proteome Human cell line Immunoprecipitation 
GenomicsHomo sapiens
RNA immunoprecipiation identifies novel targets of DAZL in human fetal ovary
PRJNA321858 | ENA
GenomicsdCAP-D3 ChIP-seq in Drosophila S2 cells
The goal of this experiment was to identify genomic dCAP-D3 binding sites in Drosophila S2R+ cells dCAP-D3 was immunoprecipitated in two separate experiments with antibody YZ834 which was developed in the Longworth lab. IgG immunoprecipiation was performed alongside the dCAP-D3 immunoprecipitation ...
ORGANISM(S): Drosophila melanogaster 
2016-08-02 | E-GEOD-74413 | biostudies-arrayexpress
Transcriptomicsm6A/m-Seq of human B-lymphocyte cell lines from healthy controls and major depressive disorder patients
N6-Methyladenosine (m6A) and N6,2′-O-dimethyladenosine (m6Am) are abundant mRNA modifications that regulate transcript processing and translation. The role of both, here termed m6A/m, in the human stress response are currently unknown. Here, we provide m6A/m-Seq of immortalied cell lines derived fro...
ORGANISM(S): Homo sapiens 
2018-07-10 | GSE113798 | GEO
UnknownSequestosome 1 Is Part of the Interaction Network of VAPB.
Not available
S-EPMC8707790 | biostudies-literature
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