Dixon K K - OmicsDI

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Unknown (1096)
Transcriptomics (25)
Genomics (16)
Proteomics (15)
Metabolomics (7)
Models (1)

Organisms

Homo sapiens (31)
Arabidopsis thaliana (6)
Mus musculus (5)
Rattus norvegicus (2)
Arachis hypogaea (1)
Azotobacter vinelandii DJ (1)
Azotobacter vinelandii (1)
Bacillus anthracis str. Sterne (1)
Herbaspirillum seropedicae (1)
Medicago truncatula (1)
Drosophila melanogaster (1)
Anaerostipes caccae (1)
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Bifidobacterium longum subsp. longum (1)
Blautia producta ATCC 27340 = DSM 2950 (1)
Clostridium butyricum DSM 10702 (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Galleria mellonella (1)
Lactiplantibacillus plantarum subsp. plantarum (1)
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Plasmodium falciparum 3D7 (1)
Thomasclavelia ramosa DSM 1402 (1)

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biostudies-arrayexpress (28)
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pride (13)
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Tissue

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Disease

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Technology Type

Mass Spectrometry (13)
Illumina 15K (8)
Mass spectrometry (5)
Bottom-up proteomics (4)
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Affinity purification coupled with mass spectrometry proteomics (2)
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Instrument Platform

Illumina HiSeq 4000 (2)
LTQ (2)
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Illumina HiSeq 2000 (1)
Illumina HiSeq 3000 (1)
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Direct infusion MS - positive (1)
GC-TOF-MS (1)
GCT Premier (Waters) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
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Publication Date

2022 (7)
2009 (5)
2012 (4)
2025 (4)
2024 (3)
2016 (3)
2015 (3)
2010 (3)
2007 (3)
2026 (3)
2017 (3)
2020 (2)
2019 (2)
2018 (2)
2011 (2)
2005 (1)
2013 (1)

UNIPROT ID/AC

P10687 (1)
Q9JID2 (1)

CHEBI ID

CHEBI:15428 (2)
CHEBI:16113 (2)
CHEBI:16199 (2)
CHEBI:16449 (2)
CHEBI:16811 (2)
CHEBI:16958 (2)
CHEBI:17053 (2)
CHEBI:17191 (2)
CHEBI:17754 (2)
CHEBI:25017 (2)
CHEBI:28300 (2)
CHEBI:30769 (2)
CHEBI:4167 (2)
CHEBI:78320 (2)
CHEBI:29108 (1)
CHEBI:1148 (1)
CHEBI:11750 (1)
CHEBI:132004 (1)
CHEBI:132007 (1)
CHEBI:132194 (1)
CHEBI:132293 (1)
CHEBI:134239 (1)
CHEBI:134241 (1)
CHEBI:134243 (1)
CHEBI:134270 (1)
CHEBI:134271 (1)
CHEBI:134428 (1)
CHEBI:134451 (1)
CHEBI:134561 (1)
CHEBI:136230 (1)

Metabolite Name

(+)-Taxifolin (1)
(S)-(-)-Methylsuccinic acid (1)
1,16-Hexadecanedioic acid (1)
1-Aminocyclopropanecarboxylic acid (1)
1-Methyluric acid (1)
1-Methylxanthine (1)
10-Hydroxydecanoic acid (1)
11(Z)-Eicosenoic acid (1)
12-Hydroxydodecanoic acid (1)
16-Hydroxyhexadecanoic acid (1)
2'-Deoxyadenosine (1)
2'-Deoxyguanosine (1)
2'-Deoxyinosine (1)
2,4-Dimethylphenol (1)
2,4-Quinolinediol (1)
2,4-Xylenol (1)
2,6-Dihydroxybenzoic acid (1)
2-Acetylthiazole (1)
2-Butanone, 3-methoxy-3-methyl- (1)
2-Furoic acid (1)
2-Hydroxycinnamic acid (1)
2-Isopropylmalic acid (1)
2-Ketoglutaric acid (1)
2-Methylglutaric acid (1)
2-Methylhippuric acid (1)
2-Oxindole (1)
2-Oxobutanoic acid (1)
2-Pentadecanone (1)
2-Phenylacetamide (1)
2-Picolinic acid (1)

IsPrivate

False (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (17)
ChIP-seq (2)
RNA-seq of coding RNA (2)
Baseline (1)
Unknown experiment type (1)
Comparative genomic hybridization by array (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (132)
2025 (130)
2023 (128)
2021 (118)
2024 (107)
2020 (76)
2019 (58)
2018 (51)
2015 (44)
2017 (44)
2016 (40)
2014 (28)
2009 (26)
2012 (24)
2026 (24)
2011 (21)
2013 (18)
2010 (17)
2008 (14)
2007 (13)
2005 (3)
2001 (3)
2006 (2)
2003 (2)
2000 (1)

Lab affiliation

Columbia University Department of Biological Sciences and Department of Chemistry (1)
Department of Biochemistry and Molecular Biology, Bio21 Institute, The University of Melbourne, Parkville, Victoria, Australia (1)
Department of Biology, Maynooth University, Co. Kildare, Ireland. (1)
Department of Medical Genetics, University of British Columbia, Vancouver, Canada (1)
Department of Pediatrics Indiana University School of Medicine Riley Hospital for Children (1)
Departments of Medicine (Oncology) and of Chemical and Systems Biology, Stanford School of Medicine, Stanford, CA, USA Stanford Cancer Institute, Stanford, CA, USA (1)
Helmholtz-Centrte for Environmental Research - UFZ GmbH Department of Molecular Systems Biology Permoserstr. 15 04318 Leipzig, Germany (1)
Indiana University School of Medicine (1)
Laboratory for Biological Mass Spectrometry, Biosciences Institute, Newcastle University, Newcastle-upon-Tyne, NE2 4HH, UK (1)
Roivant sciences, Discovery Platform, Advanced simulations, New York City, NY (1)
Sir Peter MacCallum Department of Oncology, University of Melbourne, Australia; Peter MacCallum Cancer Centre, Melbourne, Australia (1)
The Walter and Eliza Hall institute of Medical Research, Department of Medical Biology, Faculty of Medicine, Dentistry and Health Sciences, The University of Melbourne (1)
University of British Columbia (1)

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Leucine degradation metabolite ratio as a measure of meropenem susceptibility in carbapenem-resistant Klebsiella pneumoniae

Rapid detection of carbapenem-resistant Klebsiella pneumoniae (CRKP) is essential for effective clinical management and surveillance. This study investigated volatile organic compounds (VOCs) as phenotypic biomarkers of carbapenem resistance, with the goal of developing a translationally...

2026-06-09 | MTBLS13539 | MetaboLights

MR-based PET attenuation correction using a combined ultrashort echo time/multi-echo Dixon acquisition.

Not available

S-EPMC7375929 | biostudies-literature

LC-MS/MS metabolomics unravels the resistant phenotype of carbapenemase-producing Enterobacteriaceae

Introduction: The degree of antimicrobial resistance demonstrated by carbapenemase-producing Enterobacteriaceae (CPE) represents a growing public health challenge. Conventional methods for detecting CPE involve culture-based techniques with lengthy incubation steps. There is a ne...

2025-08-04 | MTBLS10129 | MetaboLights

Comparison of Dixon Sequences for Estimation of Percent Breast Fibroglandular Tissue.

Not available

S-EPMC4806997 | biostudies-literature

Diagnostic utility of whole body Dixon MRI in multiple myeloma: A multi-reader study.

Not available

S-EPMC5495520 | biostudies-literature

High-Resolution Free-Breathing Quantitative First-Pass Perfusion Cardiac MR Using Dual-Echo Dixon With Spatio-Temporal Acceleration.

Not available

S-EPMC9099052 | biostudies-literature

Transcription profiling of human cell lines K562, Me45 and HCT116 with or without p53 knock-out to study the effect of ionizing radiation

The objective of the experiment was to compare changes in the transcriptome induced by direct X-irradiation of cells, using the human K562 erythroleukemic, Me45 melanoma and HCT116 colon cancer cell lines. The transcript levels of K542 and Me45 RNA samples were measured using Affymetrix HG-U133A mic...

ORGANISM(S): Homo sapiens

2010-09-28 | E-MEXP-2623 | biostudies-arrayexpress

Attenuation correction using deep Learning and integrated UTE/multi-echo Dixon sequence: evaluation in amyloid and tau PET imaging.

Not available

S-EPMC8411350 | biostudies-literature

Fat fractions from high-resolution 3D radial Dixon MRI for predicting metastatic axillary lymph nodes in breast cancer patients.

Not available

S-EPMC7653281 | biostudies-literature

Binding specificity of the Porphyromonas gingivalis heme and hemoglobin receptor HmuR, gingipain K, and gingipain R1 for heme, porphyrins, and metalloporphyrins.

Not available

S-EPMC95451 | biostudies-literature