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TranscriptomicsPriming defense genes and metabolites in hybrid poplar by the green leaf volatile cis-3-hexenyl acetate
• Herbivore-induced plant volatiles (HIPVs), in addition to attracting natural enemies of herbivores, can serve a signaling function within plants by acting as wound signals that induce or prime defenses. However, particularly in woody plants, which compounds within HIPV blends are capable of act...
ORGANISM(S): Populus x canadensis 
2010-05-25 | E-GEOD-11955 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human response to carboplatin in chemosensitive and chemoresistant ovarian cancer cells.
Use of expression arrays to identify genes from ovarian cancer cells that are associated with carboplatin sensitivity and resistance as defined by ChemoFX assay.
ORGANISM(S): Homo sapiens 
2007-09-01 | E-GEOD-1926 | biostudies-arrayexpress
TranscriptomicsEffects of mating on gene expression profiles of mature ant queens
Will be added/updated once the manuscript is finalized. Cardiocondyla obscurior queens. Three treatments: virgin queens, queens mated by real males, queens sham-mated (by sterile males). Queens collected 1 week and 8 week after mating. seven loops for queens collected 1 week after mating; nine loops...
ORGANISM(S): Cardiocondyla obscurior 
2013-10-26 | E-GEOD-24953 | biostudies-arrayexpress
TranscriptomicsGene expression analysis of osteosarcoma tumor-initiating cells (High) vs bulk tumor cells (Low)
In the cancer stem cell model a cell hierarchy has been suggested as an explanation for intratumoral heterogeneity, and tumor formation is thought to be driven by this tumor cell subpopulation. The identification of cancer stem cells in osteosarcoma (OS) and the biological processes dysregulated in ...
ORGANISM(S): Homo sapiens 
2011-11-04 | E-GEOD-33458 | biostudies-arrayexpress
TranscriptomicsTranscriptional profile of Candida albicans DAY286 versus UPC2 delete, both at 1% oxygen (hypoxia).
Whole genome microarray were used to generate the transcriptional profile of C.albicans UPC2 delete in hypoxia. RNA was isolated from DAY286 or UPC2 delete grown in YPD medium in hypoxia at 30 degree Celsius for 3.5 h, and labeled with Cy3 or Cy5. Nine independent biological replicates were compared...
ORGANISM(S): Candida albicans 
2010-11-15 | E-GEOD-24075 | biostudies-arrayexpress
TranscriptomicsTranscriptional profile of Candida albicans during Hypoxic conditions.
Whole genome microarray were used to generate the transcriptional profile of C.albicans in hypoxic condition. RNA was isolated from DAY286 grown in YPD medium in normoxia or hypoxia at 30 degree Celsius for 3.5 h, and labeled with Cy3 or Cy5. Eight independent biological replicates were compared. 2 ...
ORGANISM(S): Candida albicans 
2010-11-15 | E-GEOD-24073 | biostudies-arrayexpress
TranscriptomicsTranscriptional profile of Candida albicans DAY286 culture without ketoconazole versus DAY286 culture with 0.04 μg/ml ketoconazole, both at 20% oxygen (normoxia).
Whole genome microarray were used to generate the transcriptional profile of C.albicans in the presence of ketoconazole. RNA was isolated from DAY286 grown with or without ketoconazole in YPD medium in normoxia at 30 degree Celsius for 3.5 h, and labeled with Cy3 or Cy5. Four independent biological ...
ORGANISM(S): Candida albicans 
2010-11-15 | E-GEOD-24074 | biostudies-arrayexpress
TranscriptomicsHIT T cell versus B cell line proof-of-principle
We have developed a multi-analyte fluid-phase protein array technology termed high-throughput immunophenotyping using transcription (HIT). This method employs a panel of monoclonal antibodies, each tagged with a unique oligonucleotide sequence that serves as a molecular barcode. After staining a s...
ORGANISM(S): Homo sapiens 
2010-05-26 | E-GEOD-10761 | biostudies-arrayexpress
TranscriptomicsExpression analysis of murine bone marrow (BMDM) derived macrophages stimulated with C1q
Investigation of whole genome gene expression level changes in BMDM adhered for 4 or 18hrs to Lab Tek Chamber slides pre-coated with 4ug/ml of human serum albumin (HSA) (control protein) or purified human C1q and treated with lipopolysaccharide (LPS: 20ng/ml) Mycobacterium avium 101 (M avium) or ap...
ORGANISM(S): Mus musculus 
2012-03-01 | E-GEOD-35280 | biostudies-arrayexpress
TranscriptomicsBiomarker genes highlight intraspecific and interspecific variations in the responses of Pinus taeda L. and Pinus radiata D. Don to Sirex noctilio F. acid gland secretions
Sirex noctilio F., a Eurasian horntail woodwasp recently introduced into North America, oviposits in pines and other conifers and in the process spreads a phytopathogenic fungus that serves as a food source for its larvae. During oviposition the woodwasp also deposits a mucus produced in its acid (...
ORGANISM(S): Pinus taeda 
2012-08-09 | E-GEOD-40000 | biostudies-arrayexpress
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