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MetabolomicsChilling-induced restructuring of seed-borne endophytes enhances early cold tolerance and microbiome assembly in common vetch
Chilling stress constitutes a major abiotic constraint on plant growth and productivity. Although plants mobilize well-characterized physiological and transcriptional acclimation mechanisms, the integrative roles of root-associated microbiomes and root exudate chemistry in chilling tolerance, partic...
2026-04-21 | MTBLS14339 | MetaboLights
TranscriptomicsA microarray approach to identify genes involved in seed and mesocarp development in peach
Background Field observations and a few physiological studies pointed out that peach embryogenesis and fruit development are strictly related. In fact, attempts to stimulate parthenocarpic fruit development by means of external tools failed. Moreover, physiological disturbances during the early embr...
ORGANISM(S): Prunus persica 
2011-06-27 | E-GEOD-22582 | biostudies-arrayexpress
TranscriptomicsRNA-seq of two Trifolium pratense genotypes, Tripo and Lasang, from early to late developmental stages of flower development
Red clover (Trifolium pratense L.) is one of the most important legume forage species in temperate livestock agriculture. Tetraploid red clover cultivars are generally producing less seed than diploid cultivars. Improving the seed setting potential of tetraploid cultivars is necessary in order to ut...
ORGANISM(S): Trifolium pratense 
2017-01-31 | E-MTAB-5117 | biostudies-arrayexpress
MetabolomicsMetabolic alterations in pea leaves during arbuscular mycorrhiza development

Arbuscular mycorrhiza (AM) is known to be a mutually beneficial plant-fungal symbiosis; however, the effect of mycorrhization is heavily dependent on multiple biotic and abiotic factors. Therefore, for the proper employment of such plant-fungal symbiotic systems in agriculture, a detailed underst...

2020-02-09 | MTBLS893 | MetaboLights
ProteomicsA quantitative acetylomic analysis of early seed development in rice (Oryza sativa L.)
Here, we reported the first quantitative acetylomic case in plants with a special focus on the rice early seed development. The results obtained from this work not only aimed to provide an overall view of the acetylation events, but also explored the regulatory roles of PKA during early seed develop...
ORGANISM(S): Oryza sativa (Rice) 
2017-07-04 | PXD005982 | Pride
Acetylome Post-translational modification Rice (oryza sativa l.) Early seed development 
TranscriptomicsFlux of transcript patterns during soybean seed development
Background: To understand gene expression networks leading to functional properties of the soybean seed, we have undertaken a detailed examination of soybean seed development during the stages of major accumulation of oils, proteins, and starches, as well as the desiccating and mature stages, using ...
ORGANISM(S): Glycine max 
2010-05-05 | E-GEOD-18620 | biostudies-arrayexpress
TranscriptomicsGene Expression Changes in the Development of the Soybean Seed-Early Maturation Stage
We investigated soybean seed development because (1) soybean seeds are a major source of food and fuel, (2) soybean seeds have been an excellent system for studying the basic processes controlling seed development for over three decades, and (3) new soybean genomic resources, including the sequence ...
ORGANISM(S): Glycine max 
2013-04-17 | E-GEOD-46096 | biostudies-arrayexpress
MetabolomicsA systems analysis with “simplified source-sink model” reveals metabolic reprogramming in a pair of source-to-sink organs during early fruit development in tomato by LED light treatments
Tomato (Solanum lycopersicum) is a model crop for studying development regulation and ripening in flesh fruits and vegetables. Supplementary light to maintain the optimal light environment can lead to the stable growth of tomatoes in greenhouses and areas without sufficient daily light integral. Tec...
2018-09-27 | MTBLS699 | MetaboLights
ProteomicsProteomic profiling for elucidating the molecular mechanism in early seed development in rice
Understanding the molecular mechanisms underlying early seed development is important for improving grain yield and quality in crop plants. To investigate the molecular mechanisms that occur during early seed development, we performed comparative label-free quantitative proteomic analysis on develop...
ORGANISM(S): Oryza sativa (Rice) 
2023-12-05 | PXD043162 | Pride
Rice Early seed development Ctp synthase Proteomic profiling Mcm proteins Protein stability 
TranscriptomicsIdentification of soybean seed developmental stage specific and tissue specific miRNA targets by degradome sequencing .
Five degradome libraries were constructed from three different seed developmental stages. Separate degradome libraries were constructed for seed coat and cotyledons to identify the tissue specific miRNAs and their potential targets. Sequencing and analysis of degradome libraries gives identification...
ORGANISM(S): Glycine max 
2012-08-07 | E-GEOD-34433 | biostudies-arrayexpress
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