Ejaculate - OmicsDI

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Transcriptomics (2004)
Unknown (413)
Genomics (191)
Proteomics (106)
Metabolomics (23)
Other (3)
Methylation profiling (1)
Multiomics (1)

Organisms

Homo sapiens (439)
Mus musculus (393)
Saccharomyces cerevisiae (152)
Drosophila melanogaster (115)
Thermus thermophilus HB8 (71)
Bos taurus (59)
Arabidopsis thaliana (57)
Rattus norvegicus (57)
Sus scrofa (47)
Caenorhabditis elegans (43)
Candida albicans (29)
Danio rerio (29)
Gallus gallus (27)
Escherichia coli (25)
Ciona intestinalis (16)
Enterococcus faecalis (14)
Yersinia pestis (13)
Listeria monocytogenes (13)
Daphnia magna (12)
Picea glauca (11)
Zea mays (11)
Schizosaccharomyces pombe (11)
Dictyostelium discoideum (10)
Fundulus heteroclitus (10)
Mycobacterium tuberculosis (10)
Sinorhizobium meliloti (10)
Fagus sylvatica (9)
Actinobacillus pleuropneumoniae (8)
Ralstonia solanacearum (8)
Trypanosoma brucei (8)

Organisms

Homo sapiens (8)
Drosophila melanogaster (3)
Bos taurus (2)
Bathygobius fuscus (1)
Oryctolagus cuniculus (1)
Sus scrofa (1)
Danio rerio (1)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (2139)
pride (47)
ENA (33)
EGA (29)
MassIVE (25)
MetaboLights (23)
geo (15)
iProX (12)
jPOST (10)
PAXDB (9)
EVA (4)
GPMDB (3)
PanoramaPublic (3)

Tissue

Sperm (20)
Spermatozoon (7)
Semen (6)
Seminal plasma (6)
Accessory sex gland (4)
Spermatozoid (4)
Female reproductive system (3)
Seminal vesicle fluid (3)
Spermatheca (3)
Male reproductive system (2)
Oviductal fluid (2)
Testis (2)
Bodily fluid (1)
Bursa copulatrix (1)
Ejaculatory duct (1)
Endosperm (1)
Extracellular vesicle (1)
Female reproductive gland (1)
Hemolymph (1)
Internal female genital organ (1)
Male gamete (1)
Male reproductive gland (1)
Male reproductive gland secretion (1)
Oviduct (1)
Spermary (1)
Uterine fluid (1)

Disease

Normal (20)
Carcinoma (3)
Breast carcinoma (3)
Breast cancer (3)
Hypertension (2)
Breast adenocarcinoma (2)
Chronic myelogenous leukemia (2)
Cancer (2)
Adenocarcinoma (2)
Testicular seminoma (1)
Amyotrophic lateral sclerosis (1)
Measles virus infected (1)
Hepatomegaly (1)
Oropharynx squamous-cell carcinoma in DiseaseLocation oropharynx has DiseaseStaging lymph node negative (N0) (1)
T. circumcincta infection (1)
Serratia marcesens infected (1)
Myeloid neoplasm (1)
Cryptozoospermia (1)
Embryonic lethal at day 8.5 to 9.5 (1)
Infected with IBDV strain F52/70 (1)
Postnatal day 18 was the earliest time point at which structural differences between testes from wild-type and pcd3J-/- mice were observed via histopathology. (1)
Whitehart (1)
Invasive Ductal Carcinoma (1)
Squamous cell carcinoma has accession C0007137 in DiseaseStateDatabase NCI_Thesaurus (1)
Mock 24 h (1)
Internal Carotid Artery Stenosis (NCI Metathesaurus C0340569) has DiseaseStaging Asymptomatic (1)
Insulin resistance (1)
Drechmeria coniospora infected (1)
Carotid artery disease: ASYMPTOMATIC high-grade inner carotid artery stenosis (1)
Infected (1)

Technology Type

Mass Spectrometry (47)
Shotgun proteomics (34)
Mass spectrometry (17)
Mass spectrometry assay (6)
Bottom-up proteomics (6)
Gel-based experiment (6)
SWATH MS (4)
Data-independent acquisition (2)
Illumina HiSeq 4000, ILLUMINA (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Data-dependent acquisition (1)
HDMSE (1)
SRM/MRM (1)

Instrument Platform

Illumina HiSeq 2500 (19)
Illumina NovaSeq 6000 (16)
Scanning hardware (11)
NextSeq 500 (8)
Illumina HiSeq 2000 (8)
ScanArray 5000 [PerkinElmer] (7)
G2565AA DNA microarray scanner [Agilent] (7)
Axon- GenePix4000B (7)
NextSeq 2000 (6)
Illumina HiSeq 4000 (6)
GenePix Professional 4200A [Axon Instruments] (5)
GenePix 4000B [Axon Instruments] (5)
Genepix (4)
GenePix Personal 4100A [Axon Instruments] (4)
418 [Affymetrix] (4)
Illumina HiSeq 1000 (4)
Other (3)
PromethION (2)
Axon GenePix4000B (2)
PacBio RS II (2)
FUJIFILM BAS-5000 scanning hardware (2)
ProScanArray Microarray Scanner [PerkinElmer] (2)
ScanArray 4000 [PerkinElmer] (2)
ScanArray [PerkinElmer] (2)
Other (2)
GeneChip Scanner 3000 [Affymetrix] (2)
GenePix 4000A [Axon Instruments] (2)
BAS-5000 [FUJIFILM] (2)
Illumina Genome Analyzer IIx (2)
G2565BA DNA microarray scanner [Agilent] (2)

Publication Date

2010 (493)
2013 (253)
2012 (219)
2011 (209)
2014 (182)
2008 (155)
2009 (140)
2015 (124)
2007 (90)
2016 (74)
2006 (55)
2005 (38)
2024 (32)
2019 (27)
2021 (25)
2020 (23)
2026 (22)
2004 (22)
2025 (21)
2023 (20)
2018 (19)
2022 (18)
2017 (11)
2003 (7)
2002 (1)

UNIPROT ID/AC

1433E_SHEEP (6)
1433Z_SHEEP (6)
6PGD_SHEEP (6)
A1AT_SHEEP (6)
A8DR93_SHEEP (6)
AL1A1_SHEEP (6)
ALBU_SHEEP (6)
ANT3_SHEEP (6)
ANXA2_SHEEP (6)
CERU_SHEEP (6)
COF1_SHEEP (6)
FETUA_SHEEP (6)
G3P_SHEEP (6)
HBB_SHEEP (6)
IDHC_SHEEP (6)
PDXK_SHEEP (6)
PLMN_SHEEP (6)
SODC_SHEEP (6)
THIO_SHEEP (6)
TTHY_SHEEP (6)
W5NPN4_SHEEP (6)
W5NQ45_SHEEP (6)
W5NUE3_SHEEP (6)
W5NUN8_SHEEP (6)
W5NUX8_SHEEP (6)
W5NVC9_SHEEP (6)
W5NXN2_SHEEP (6)
W5NY95_SHEEP (6)
W5NYA7_SHEEP (6)
W5P1X9_SHEEP (6)

CHEBI ID

CHEBI:15891 (4)
CHEBI:89919 (3)
CHEBI:89666 (3)
CHEBI:68595 (3)
CHEBI:9352 (3)
CHEBI:85039 (3)
CHEBI:2376 (3)
CHEBI:83053 (3)
CHEBI:7575 (3)
CHEBI:72747 (3)
CHEBI:82912 (3)
CHEBI:34703 (3)
CHEBI:16978 (3)
CHEBI:6343 (3)
CHEBI:44920 (3)
CHEBI:46961 (3)
CHEBI:157848 (3)
CHEBI:3697 (3)
CHEBI:74669 (3)
CHEBI:49033 (3)
CHEBI:27891 (3)
CHEBI:73850 (3)
CHEBI:16668 (3)
CHEBI:30794 (3)
CHEBI:87248 (3)
CHEBI:7553 (3)
CHEBI:34900 (3)
CHEBI:27732 (3)
CHEBI:26078 (3)
CHEBI:64563 (3)

Metabolite Name

Glycerophosphocholine (10)
Uracil (9)
Taurine (9)
Creatine (9)
Betaine (8)
Phytosphingosine (8)
Acetylcarnitine (8)
Adenosine (8)
Creatinine (8)
Sphingosine (7)
Azelaic acid (7)
Hypoxanthine (7)
Dauricine (6)
Acarbose (6)
Solasodine (6)
Calcitriol (6)
Eicosapentaenoic acid (6)
Hydrocortisone (6)
Biliverdin (6)
Cholic acid (6)
Oleamide (6)
Spermidine (6)
Sarcosine (6)
Riboflavin (6)
Hydroquinidine (6)
Adenine (6)
Caffeine (6)
Ebastine (5)
Terfenadine (5)
Daunorubicin (5)

First Public Date

2023 (8)
2025 (4)
2014 (4)
2026 (3)
2020 (3)
2022 (2)
2021 (2)
2013 (2)
2024 (1)
2019 (1)
2018 (1)
2017 (1)
2015 (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (1389)
ChIP-chip by tiling array (123)
Comparative genomic hybridization by array (91)
RNA-seq of coding RNA (85)
ChIP-seq (72)
Unknown experiment type (56)
ChIP-chip by array (56)
Transcription profiling by tiling array (49)
Methylation profiling by array (44)
Methylation profiling by high throughput sequencing (40)
RNA-seq of non coding RNA (28)
Other (26)
Genotyping by array (12)
DNA-seq (8)
MicroRNA profiling by array (6)
RNA-seq of coding RNA from single cells (6)
Animal - High-throughput sequencing (4)
RNA-seq of total RNA (4)
MicroRNA profiling by high throughput sequencing (3)
Bisulfite-seq (3)
MeDIP-seq (2)
ATAC-seq (2)
Transcription profiling by SAGE (1)
Two-color microarray (1)
Cell line - Two-color microarray (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by RT-PCR (1)
Single nucleus RNA sequencing (1)

Release Date

2010 (495)
2013 (262)
2012 (225)
2011 (216)
2014 (194)
2008 (155)
2009 (146)
2015 (130)
2016 (97)
2007 (89)
2023 (59)
2021 (56)
2006 (56)
2022 (55)
2024 (53)
2019 (45)
2005 (39)
2020 (38)
2017 (34)
2018 (31)
2025 (30)
2004 (23)
2026 (16)
2003 (7)
2002 (1)

Lab affiliation

Departamento de Medicina Animal, Hospital Clínico Veterinario Universidad de Extremadura Avd de la Universidad s/n 10003 Cáceres SPAIN (2)
Department of Medicine and Animal Surgery, Faculty of Veterinary Science, University of Murcia, Spain (2)
Instituto de Ciencia y Tecnologia Animal Universitat Politècnica de València Valencia, Spain (2)
1: Physiology of reproduction, Veterinary Faculty, Campus of Excellence Mare Nostrum, University of Murcia. 2: IMIB-Arrixaca, Murcia, Spain. (1)
Assistant Professor, Mass spectrometry Facility, Canadian Centre for Health and Safety in Agriculture, College of Medine, University of Saskatchewan. (1)
Biology Department, Syracuse University, USA (1)
Center for Reproductive Evolution, Biology Department, Syracuse University (1)
Center for Reproductive Evolution, Biology Department, Syracuse University, Syracuse, NY, 13244, USA (1)
Center for Reproductive Evolution, Department of Biology, Syracuse University, United States of America (1)
Center for Reproductive Evolution, Syracuse University (1)
Center of Reproductive Medicine, Shengjing Hospital of China Medical University, Shenyang 110004, China; (1)
Centre for Integrative Bee Research (CIBER) Department of Entomology University of California Riverside, CA 92521 United States of America (1)
Centre for Integrative Bee Research (CIBER) Department of Entomology University of California Riverside, CA 92521United States of America (1)
Centro de Investigación y Tecnología Animal-Instituto Valenciano de Investigaciones Agrarias (CITA-IVIA), Polígono La Esperanza nº 100, 12400 Segorbe, Castellón, Spain. (1)
Chemistry and Biochemistry, University of Windsor, Canada (1)
College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi Province, 712100, China (1)
Department of Animal Reproduction, Spanish National Institute for Agricultural and Food Research and Technology (INIA), Avda. Puerta de Hierro km 5.9, 28040 Madrid, Spain. (1)
Department of Biology, Syracuse University, Syracuse NY, 13244, USA (1)
Department of Cell Biology and Histology, Faculty of Medicine, Campus Mare Nostrum,University of Murcia, 30100 Murcia, IMIB, Spain (1)
Department of Ecology and Genetics, Uppsala University (1)
Department of Entomology, Cornell University, USA (1)
Department of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland (1)
Department of Integrative Biology, University of California Berkeley (1)
Department of Medicine and Animal Surgery, Faculty of Veterinary Science, University of Murcia, E-30100 Murcia, Spain (1)
Department of Obstetrics and Gynaecology, Medical Faculty, Cologne University, 50931, Cologne, Germany (1)
Department of Physiology, Anatomy and Genetics, University of Oxford (1)
Division of Maternal Fetal Medicine Department of Obstetrics and Gynecology Oregon Health & Science University 3181 SW Sam Jackson Park Road, Mail Code L-458, Portland, OR, 97239, USA (1)
Ecology Division Department of Zoology Stockholm University, Sweden (1)
Edward Grey Institute Department of Zoology University of Oxford (1)
Edward Grey Institute, Department of Zoology, University of Oxford, Oxford, UK (1)

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Ejaculate samples for male infertility screening

The problem of the male reproductive system has both medical and social importance. It is highlighted that spermatozoa or seminal plasma are suitable samples for proteomic analysis of the male reproductive system. We suggested that the ejaculate could serve as one of the analytic specimens to determ...

ORGANISM(S): Homo sapiens (Human)

2024-05-23 | PXD046848 | Pride

Identification of novel ejaculated seminal fluid proteins in a seed beetle and division of labour across male accessory reproductive glands

The male ejaculate contains a multitude of seminal fluid proteins (SFPs), many of which are key reproductive molecules. However, the identification of SFPs is notoriously difficult and a detailed understanding of this complex phenotype has only been achieved in a few model species. We employed a rec...

ORGANISM(S): Callosobruchus maculatus

2025-06-28 | PXD009967 | Pride

Novel proteins Accessory sex glands Ejaculate Seed beetle

Sperm competition accentuates selection on ejaculate attributes.

Not available

S-EPMC6451384 | biostudies-literature

Ejaculate fraction-driven changes in porcine uterine gene expression and histological profiles

Seminal plasma contains bioactive components capable of modulating the uterine environment. Although the boar ejaculate is fractionated, with each portion differing in composition, the cumulative effect of these fractions on the female reproductive tract remains poorly understood. This study evaluat...

ORGANISM(S): Sus scrofa

2026-05-23 | GSE298329 | GEO

Selection for longer lived sperm within ejaculate reduces reproductive ageing in offspring.

Not available

S-EPMC6591544 | biostudies-literature

The Application of Ejaculate-Based Shotgun Proteomics for Male Infertility Screening.

Not available

S-EPMC10813512 | biostudies-literature

Male-male behavioral interactions drive social-dominance-mediated differences in ejaculate traits.

Not available

S-EPMC7937186 | biostudies-literature

Haploid selection within a single ejaculate increases offspring fitness.