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Analysis of differential gene expression under loss of emb-4
Germline small RNA pathways initiate silencing of repetitive elements in animals and an interplay of nuclear small RNAs and chromatin modifications maintain this silencing, protecting the germline from spreading of transposable elements. In C. elegans germline, nuclear argonaute protein HRDE-1 initi...
ORGANISM(S): Caenorhabditis elegans 
2017-06-30 | PXD004416 | Pride
Proper regulation of the germline transcriptome is essential for the maintenance of fertility and survival of a species. In C. elegans, germline transcriptome homeostasis hinges on a complex repertoire of small RNA pathways that act in both activating and silencing capacities. Our understanding of h...
ORGANISM(S): Caenorhabditis elegans 
2017-11-01 | GSE94455 | GEO
The Conserved Intron Binding Protein EMB-4 Plays Differential Roles in Germline Small RNA Pathways of C. elegans
Small RNA and total RNA sequencing of C. elegans with mutations in the hrde-1 and emb-4 genes
Histone H3K9me3 ChIP-seq of young adult C. elegans wildtype, and mutants emb-4 (qm31) and hrde-1 (tm1200)
EMB is a neural adhesion molecule that participates in the development of the enteric nervous system, but its specific mechanism in the development of enteric neurons remains unclear. We constructed Emb knockdown mice and performed SmartseqII transcriptome sequencing by flow sorting CD56+CD24+ intes...
ORGANISM(S): Mus musculus 
2026-05-20 | GSE327475 | GEO
Etv2 transgene was expressed from ROSA26 locus by removing floxed STOP cassette by Tie-2 Cre transgene. VE-Cad+/CD45= or VE-Cad+/CD45+ cells were sorted from control or tie-2-Etv2 E11.5 embryos (YS;yolk sac and Emb;embryo proper)and compared for gene expression in duplicate. Sample ID #1 VECAD+CD45-...
ORGANISM(S): Mus musculus 
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