Endometriosis - OmicsDI

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Unknown (2507)
Genomics (420)
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Proteomics (44)
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Metabolomics (10)
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Genomic (1)

Organisms

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Organisms

Homo sapiens (212)
Mus musculus (34)
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human gut metagenome (2)
mouse gut metagenome (2)
uncultured prokaryote (1)
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human vaginal metagenome (1)
Pseudomonas (1)
Candidozyma auris (1)
rat gut metagenome (1)
human lung metagenome (1)
human metagenome (1)
metagenome (1)

Repository

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geo (230)
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pride (17)
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Tissue

Pylorus (1)
Synovial membrane of synovial joint (1)
Subthalamic nucleus (1)
Body of tongue (1)
Myometrium (1)
Dorsal root ganglion (1)
Set of muscles of vertebral column (1)
Pharyngeal mucosa (1)
Vena cava (1)
Mammalian vulva (1)
Urethra (1)
Medulla of organ (1)
Fundus of stomach (1)
Deltoid (1)
Ventral tegmental area (1)
Superior vestibular nucleus (1)
Substantia nigra pars compacta (1)
Pericardium (1)
Synovial joint (1)
Mucosa of oral region (1)
Mixed endometrium and ovary (1)
Umbilical vein endothelium (1)
Cerebellar vermis (1)
Cardia of stomach (1)
Inferior vagus X ganglion (1)
Adrenal cortex (1)
Peritoneum (1)
Nipple (1)
Trigeminal ganglion (1)
Lateral nuclear group of thalamus (1)

Disease

Endometriosis (12)
Normal (3)
Not Available (3)
Colorectal Neoplasms (2)
Endometriosis (2)
Endometriosis of uterus (2)
Adenocarcinoma (1)
Adenomyosis (1)
Uterine fibroid (1)
Neuromuscular pain (1)
Rheumatoid arthritis (1)
Parkinson's disease (1)
Prostate cancer (1)
Breast cancer (1)
Hepatocellular carcinoma (1)
Melanoma (1)
Benign prostatic hyperplasia (1)
Cholecystitis (1)
Colonic Diseases (1)
Crohn Disease (1)
Melanoma (1)
Female infertility (1)

Technology Type

Mass Spectrometry (18)
Shotgun proteomics (10)
Mass spectrometry (7)
Bottom-up proteomics (2)
Data-independent acquisition (2)
Gel-based experiment (2)
Top-down proteomics (2)
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NMR spectroscopy (1)
Mass spectrometry assay (1)
ESI (1)
SWATH MS (1)

Instrument Platform

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NextSeq 500 (3)
Instrument (3)
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Illumina HiSeq 4000 (2)
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Liquid Chromatography MS - negative - hilic (2)
ScanArray 5000 [PerkinElmer] (1)
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418 [Affymetrix] (1)
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Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
- (1)
6520B Q-TOF LC/MS (1)
Impact II (1)
MaXis (1)
Orbitrap Exploris 240 (1)
TripleTOF 6600 (1)
Thermo Scientific LTQ FT Ultra (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2025 (48)
2015 (40)
2014 (40)
2024 (38)
2023 (30)
2013 (29)
2012 (29)
2026 (29)
2020 (27)
2022 (23)
2010 (22)
2016 (20)
2019 (20)
2011 (18)
2021 (16)
2009 (15)
2008 (10)
2007 (9)
2017 (9)
2018 (7)
2005 (1)

CHEBI ID

CHEBI:16414 (4)
CHEBI:34877 (3)
CHEBI:29019 (3)
CHEBI:27592 (3)
CHEBI:17268 (3)
CHEBI:16335 (3)
CHEBI:16467 (3)
CHEBI:18019 (3)
CHEBI:17203 (3)
CHEBI:15971 (3)
CHEBI:422 (3)
CHEBI:16015 (3)
CHEBI:16737 (3)
CHEBI:16919 (3)
CHEBI:15354 (3)
CHEBI:84834 (3)
CHEBI:16643 (3)
CHEBI:17895 (3)
CHEBI:17295 (3)
CHEBI:17596 (3)
CHEBI:16828 (3)
CHEBI:64563 (3)
CHEBI:17368 (3)
CHEBI:30769 (3)
CHEBI:174625 (2)
CHEBI:190405 (2)
CHEBI:187386 (2)
CHEBI:180378 (2)
CHEBI:179258 (2)
CHEBI:173525 (2)

Metabolite Name

L-Lysine (3)
L-Proline (3)
L-Arginine (3)
L-Histidine (3)
Choline (3)
Ectoine (3)
Creatinine (3)
L-Valine (3)
N-Phenyl-2-naphthylamine (2)
Tromethamine (2)
L-Nicotine (2)
Persicachrome (2)
2-Acetylpyrrolidine (2)
N-Methyl-D-aspartic acid (2)
Tetradecanoylcarnitine (2)
N6-Methyladenosine (2)
N,O-Didesmethylvenlafaxine (2)
3-Hydroxyisovalerylcarnitine (2)
Stearoylcarnitine (2)
L-Norleucine (2)
Hexylamine (2)
N-Acetylcadaverine (2)
2-Methylbutyrylglycine (2)
L-Alanine (2)
Betaine (2)
Panaquinquecol 4 (2)
7-Dehydrodesmosterol (2)
5-Methylcytosine (2)
1-Methylinosine (2)
Pseudoecgonine (2)

First Public Date

2025 (53)
2024 (52)
2026 (45)
2023 (34)
2014 (32)
2020 (27)
2019 (25)
2022 (24)
2021 (19)
2017 (13)
2015 (9)
2018 (7)
2016 (6)
2013 (1)

Classification

fungi (1)

Study status

Completed (3)
Active, not recruiting (1)
Withdrawn (1)
Not provided (1)
Recruiting (1)

Study type

Transcription profiling by array (82)
RNA-seq of non coding RNA (51)
RNA-seq of coding RNA (26)
ChIP-seq (14)
Other (6)
Observational (5)
Methylation profiling by array (4)
RNA-seq of coding RNA from single cells (4)
Unknown experiment type (2)
Proteomic profiling by array (2)
Interventional (2)
Animal - Single-cell sequencing (1)
Cell line - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
Single nucleus RNA sequencing (1)

Release Date

2025 (428)
2022 (317)
2023 (306)
2024 (299)
2021 (275)
2020 (200)
2019 (142)
2018 (108)
2015 (103)
2014 (83)
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2016 (67)
2026 (67)
2012 (59)
2013 (48)
2011 (43)
2010 (33)
2009 (21)
2008 (17)
2007 (7)
2005 (4)
2006 (2)
2004 (1)

Lab affiliation

University of Southampton (2)
1. Competence Centre on Health Technologies, Tiigi 61b, Tartu, Estonia 2. Chair of Obstetrics and Gynaecology, Institute of Biomedicine, University of Tartu, Ravila 19, Tartu, Estonia (1)
1The Ritchie Centre, Hudson Institute of Medical Research.Shanti Gurung1(shanti.gurung@hudson.org.au) Jacqueline Piskopos1(jpis0002@student.monash.edu) Joel Steele2 (joel.steele@monash.edu) Ralf Schittenhelm2 (ralf.schittenhelm@monash.edu) Anup Shah2 (anup.shah@monash.edu) Fiona Cousins1 (fiona.cousins@hudson.org.au) Thomas Tapmeier1,3 (thomas.tapmeier@monash.edu) Caroline E. Gargett1,3 (caroline.gargett@hudson.org.au) (1)
Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna, Waehringer Straße 38, 1090, Vienna, Austria (1)
Department of Gynecology and Obstetrics - Ribeirao Preto Medical School - University of Sao Paulo (1)
Department of Obstetrics and Gynecology, School of Medicine, Stanford University, CA, USA. Igenomix Foundation, Instituto de Investigación Sanitaria Hospital Clínico (INCLIVA), Valencia, Spain (1)
Department of Reproductive Endocrinology - University of Zurich, Switzerland (1)
Department of Surgery and Anaesthesia, University of Otago (Wellington) (1)
Director, Center for Gynepathology Research Member, Center for Environmental Health Sciences Member, Center for Emergent Behaviors of Integrate Cellular Systems Member, Koch Institute for Integrative Cancer Research (1)
Key Laboratory of Women and Children’s Critical Diseases Research, Fujian Maternity and Child Health Hospital College of Clinical Medicine for Obstetrics & Gynecology and Pediatrics, Fujian Medical University, Fuzhou, Fujian Province, China (1)
Ningbo Women and Children’s Hospitalen’s Hospitalgbo Women and Children’s Hospital (1)
Physiology & Pharmacology, Cumming School of Medicine, University of calgary, Cagary (1)
Proteomics Platform CIC bioGUNE Bizkaia Tech. Park Build. 800 4860 Derio (Spain) (1)
Protim, Univ Rennes, Inserm, EHESP, Irset - UMR_S 1085 (1)
School of Medicine, Xiamen University, Xiamen, China (1)
University of Oxford, NDM Research Building, Target Discovery Institute (1)

Location

United States (6)

Keyword

Compression Anastomosis (2)
Diabete Mellitus (1)
Sickle Cell Disease (1)
Sjogren’s Syndrome (1)
Rocuronium (1)
Observational (1)
Colorectal malignancy (1)
Diverticulitis (1)
Colonic inertia (1)
Colorectal polyps (1)
Neuromuscular blockade (1)

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Symptomatology and Serum Nuclear Magnetic Resonance Metabolomics; Do They Predict Endometriosis in Fertile Women Undergoing Laparoscopic Sterilisation? A Prospective Cross-sectional Study

Endometriosis is a common, chronic inflammatory condition, thought to have a higher incidence in symptomatic women, yet, commonly associated symptoms do not always correlate with the presence or severity of disease and diagnosis requires surgery. We prospectively collected data and assessed symptomo...

2023-05-26 | MTBLS2040 | MetaboLights

UHPLC-OE-MS metabolic profile of follicular fluid in patients with ovarian endometriosis: a pilot study of an endometriosis cohort

BACKGROUND: Endometriosis is a common benign gynaecological disorder. A number of studies have confirmed that the occurrence of disease in endometriosis patients is associated with metabolic changes in biological fluids and tissues. We set out to investigate the metabolic charact...

2024-02-20 | MTBLS8621 | MetaboLights

Changes in eutopic endometrial gene expression during the progression of experimental endometriosis in the baboon, Papio anubis

Endometriosis is associated with aberrant gene expression in the eutopic endometrium of women with disease. To determine if the development of endometriotic lesions directly impacts eutopic endometrial gene expression, we sequentially analyzed the eutopic endometrium across the time course of diseas...

ORGANISM(S): Papio anubis

2015-08-27 | E-GEOD-72428 | biostudies-arrayexpress

Complement Roles Revealed by Immune Gene Profiling in Endometriosis and Endometriosis-Associated Ovarian Cancer

Mechanisms of immune dysregulation against established tumors are relatively well understood. Much less is known about the role of immune effectors against cancer precursor lesions. Endometrioid and clear cell ovarian tumors may partly derive from endometriosis, a commonly diagnosed chronic inflamma...

ORGANISM(S): Homo sapiens

2015-01-07 | E-GEOD-57545 | biostudies-arrayexpress

Endometriosis transcription profiling

Endometriosis is a complex pathological condition in which multiple components are involved in the disease development and clinical outcome. Endometriosis is mainly an inflammatory codition estrogen-dependent, with unknown pathogenesis, that is characterized by dissemination of edometrium tissue in ...

ORGANISM(S): Homo sapiens

2013-11-30 | E-GEOD-25628 | biostudies-arrayexpress

Gene expression profiles of endometriosis

Endometriosis is a common disease seen by gynecologists. Clinical features involve pelvic pain and unexplained infertility. Although endometriosis is pathologically characterized by endometrial tissue outside the normal uterine location, endometriosis is otherwise not easily explained. Endometriomas...

ORGANISM(S): Homo sapiens

2011-05-09 | E-GEOD-23339 | biostudies-arrayexpress

Endometrial methylome of patients with endometriosis

Alterations in endometrial DNA methylation profile have been proposed as one potential mechanism initiating the development of endometriosis. However, the normal endometrial methylome is influenced by the cyclic hormonal changes and the menstrual cycle phase-dependent epigenetic signature should be ...

ORGANISM(S): Homo sapiens

2016-02-15 | E-GEOD-73948 | biostudies-arrayexpress

Endometrial methylome of patients without endometriosis

ORGANISM(S): Homo sapiens

2016-02-15 | E-GEOD-73949 | biostudies-arrayexpress

Peritoneal endometriosis

We performed gene expression analysis human peritoneal endometriosis lesions, eutopic endometrium from endometriosis patients and peritoneum form endometriosis patients.The goal of the study was to analyse gene expression differences between peritoneal endometriosis lesion and eutopic endometrium an...

ORGANISM(S): Homo sapiens

2012-12-06 | E-MTAB-694 | biostudies-arrayexpress

Proteomics of endometriosis

This project aims at comparing endometrium from women with and without endometriosis during the secretory phase of menstrual cycle. The present results constitute a first step towards identifying potential diagnosis biomarkers and may provide a better understanding of endometriosis especially the et...

ORGANISM(S): Homo sapiens (Human)

2022-04-01 | PXD012981 | Pride

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