Epitope discovery

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Mass Spectrometry (130)
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CHEBI ID

CHEBI:195297 (1)
CHEBI:17502 (1)
CHEBI:195296 (1)
CHEBI:137945 (1)
CHEBI:195298 (1)
CHEBI:16189 (1)
CHEBI:37691 (1)
CHEBI:64555 (1)
CHEBI:63552 (1)
CHEBI:17459 (1)
CHEBI:49182 (1)
CHEBI:27435 (1)
CHEBI:15349 (1)
CHEBI:41425 (1)
CHEBI:16711 (1)
CHEBI:9380 (1)
CHEBI:6426 (1)
CHEBI:41250 (1)
CHEBI:28998 (1)
CHEBI:58360 (1)
CHEBI:68428 (1)
CHEBI:62413 (1)
CHEBI:134206 (1)
CHEBI:16654 (1)
CHEBI:165849 (1)
CHEBI:86068 (1)
CHEBI:1606 (1)
CHEBI:15757 (1)
CHEBI:28918 (1)
CHEBI:19092 (1)

Metabolite Name

Metaphosphoric acid (HPO3) (1)
1,5-anhydro-D-mannitol (1)
(S)-methylmalonate semialdehyde (1)
2-Methylpropanaloxime (1)
2-Methyl-6-oxohepta-2_4-dienal (1)
Bis-tris (1)
Ethyl 4-(3-oxo-2,3-dihydroisothiazol-2-yl)benzoate (1)
Acetylphenol (1)
N-Carbamoyl-L-methionine (1)
Acetoneoxime (1)
4-Coumarylalcohol (1)
Glycerophosphoethanolamine (GPE) (1)
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5-Hydroxyconiferylalcohol (1)
Loganetin (1)
Acetylserine (1)
Gulose (1)
(S)-4-Amino-5-oxopentanoate (1)
4-Hydroxy-2-butynal (1)
3-(1-Pyrazolyl)-alanine (1)
1-Methylpyrrolinium (1)
Noradrenaline (1)
Syringin (1)
1-Aminocyclopropane-1-carboxylate (1)
(R)-4-Dehydropantoate (1)
O-Propanoylcarnitine (1)
Methylimidazoleaceticacid (1)
Orthophosphate (1)
(4E)-2-Oxohexenoicacid (1)
3-Guanidinopropanoate (1)

First Public Date

2018 (4)
2014 (4)
2026 (3)
2013 (3)
2022 (2)
2017 (2)
2025 (1)
2021 (1)
2020 (1)

Study type

ChIP-seq (6)
Transcription profiling by array (5)
Antigen profiling (3)
ChIP-chip by tiling array (2)
Other (2)
RNA-seq of coding RNA (2)
CLIP-seq (1)
Transcription profiling by RT-PCR (1)
Proteomic profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2021 (101)
2022 (96)
2025 (78)
2020 (71)
2024 (70)
2023 (65)
2018 (65)
2017 (60)
2015 (54)
2019 (54)
2016 (50)
2014 (44)
2013 (26)
2012 (21)
2011 (13)
2009 (13)
2010 (12)
2008 (11)
2026 (10)
2007 (9)
2006 (5)
2005 (2)
2003 (2)
2001 (1)
1999 (1)

Lab affiliation

Laboratory of Fungal Pathogenesis, Centre for DNA Fingerprinting and Diagnostics (CDFD), Hyderabad, India (4)
Infection and Immunity Program, Biomedicine Discovery Institute & Department of Biochemistry and Molecular Biology, Monash University, Clayton, Victoria 3800, Australia (2)
Leibniz Institute for Food Systems Biology at the Technical University of Munich (2)
Shanghai Stomatological Hospital & School of Stomatology, State Key Lab of Genetic Engineering, MOE Engineering Research Center of Gene Technology, Shanghai Engineering Research Center of Industrial Microorganisms, School of Life Sciences, Fudan University (2)
Univ. Lille, Inserm, CHU Lille, U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, F-59000 Lille, France (2)
University of Edinburgh, Institute of Genetics and Molecular Medicine, Edinburgh, Scotland, United Kingdom, EH4 2XR (2)
MRC Centre for Medical Mycology University of Exeter, Geoffrey Pope Building, Stocker Road, Exeter EX4 4QD, UK (2)
Alkahest Inc. (2)
Institute of Parasitology, University of Zürich, Switzerland (2)
Harvard Medical School Cell Biology Department (2)
University of Victoria (2)
Molecular Physiology & Biophysics Department, Wright Lab, University of Iowa, USA (1)
National Center for Biotechnology (CNB-CSIC) Darwin,3, 28049 Madrid, Spain (1)
Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne Rue du Bugnon 25a, CH-1005 Lausanne (1)
Molecular Proteomics Laboratory Institute for Molecular Medicine Heinrich-Heine-Universität Düsseldorf 40225 Düsseldorf Germany (1)
Department of Chemistry, Univeristy of Kansas, Lawrence, KS, USA (1)
Nuffield Department of Medicine, University of Oxford, Oxford, UK (1)
Discovery Proteomics Facility, Target Discovery Institute,University of Oxford (1)
Dr Michal BASSANI-STERNBERG ¬ Group leader Laboratory Hi-TIDe: Immunopeptidomics Head of clinical Mass spectrometry unit Center of experimental therapeutics Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne Biopôle 3 Chemin des Boveresses 155, CH-1066 Lausanne (1)
Department of Biomedical Science, University of Padova, via U. Bassi 58b, 35121 Padova, Italy. Venetian Institute of Molecular Medicine, via Orus 2, 35129 Padova, Italy Myology Center, University of Padova, via G. Colombo 3, 35100 Padova, Italy. Department of Medicine, McGill University, Montreal, Canada. Department of Pharmacology & Therapeutics, College of Medicine, University of Florida, USA. (1)
Universität des Saarlandes (1)
Division of Genetics, Department of Medicine, Brigham and Women's Hospital (1)
Baker Heart and Diabetes Inst. (1)
Proteomics Service CIC bioGUNE Bizkaia Tec. Park Build. 800 48160 Derio (Spain) (1)
Division of chemistry I, Department of Medical Biochemistry & Biophysics, Karolinska Institutet (1)
Mass Spectrometry Laboratory, Target Discovery Institute, University of Oxford, The Old Road Campus, Oxford, OX3 7FZ, UK (1)
Institute of Functional Epigenetics, Helmholtz Zentrum München, Neuherberg, Germany (1)
225, Veterinary Medical Center University of Minnesota 1365, Gortner Avenue St. Paul, MN 55108 (1)
Astbury Centre for Structural Molecular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK (1)
Group Leader. Laboratorio de Neurobiologia Molecular y Celular. Institutto de Investigaciones Biotecnologicas (IIBio) Consejo de Investigaciones Cientificas y Tecnicas (CONICET) Universidad Nacional de San Martin (UNSAM) (1)

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The Trypanosoma cruzi Antigen and Epitope Atlas: discovery of antibody specificities in human Chagas Disease patients across human populations

These assays represent an antigen discovery screening, and epitope mapping characterization. In this screening two complete proteomes from Trypanosoma cruzi, from two different strains (CL-Brener, Sylvio X10), were displayed in the form of short peptides (tiling array, overlapped) and assayed with p...

ORGANISM(S): Homo sapiens

2022-08-20 | E-MTAB-11651 | biostudies-arrayexpress

The Immune Epitope Database and Analysis Resource in Epitope Discovery and Synthetic Vaccine Design.

Not available

S-EPMC5348633 | biostudies-literature

The Trypanosoma cruzi Antigen and Epitope Atlas: fine characterization of antibody specificities in human Chagas Disease patients across human populations

These assays represent antibody-binding assays to analyze seroprevalence of antigens and epitopes at the individual level and also to perform fine epitope mapping characterizations. In this screening 392,299 peptides derived from reactive (antigenic) regions of Trypanosoma cruzi proteins were displa...

ORGANISM(S): Homo sapiens

2022-08-20 | E-MTAB-11655 | biostudies-arrayexpress

Epitope alteration by small molecules and applications in drug discovery.

Not available

S-EPMC9278120 | biostudies-literature

B-cell epitope discovery: The first protein flexibility-based algorithm-Zika virus conserved epitope demonstration.

Not available

S-EPMC10016673 | biostudies-literature

Contrastive Learning Enables Epitope Overlap Predictions for Targeted Antibody Discovery.

Not available

S-EPMC11888244 | biostudies-literature

Contrastive learning enables epitope overlap predictions for targeted antibody discovery.

Not available

S-EPMC12921510 | biostudies-literature

A Three Component Synthetic Vaccine Containing a β-Mannan T-Cell Peptide Epitope and a β-Glucan Dendritic Cell Ligand.

Not available

S-EPMC6222438 | biostudies-literature

Mutations in epitope flanking regions for SARS-CoV-2 nucleoprotein affect proteasomal processing to alter CD8+ T cell responses

Viral CD8+ epitopes are generated by the cellular turnover of viral proteins, predominantly by the proteasome1. Mutations located within viral epitopes can result in escape from memory T cells2. Focussing on two of the most dominant SARS-CoV-2 nucleoprotein CD8+ epitopes3,4, we identified mutations ...

ORGANISM(S): recombinant SARS coronavirus

2023-10-24 | PXD032054 | Pride

Predictions versus high-throughput experiments in T-cell epitope discovery: competition or synergy?

Not available

S-EPMC3297080 | biostudies-literature

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1109 Results

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