Esi-ms/ms - OmicsDI

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Unknown (4087)
Proteomics (2939)
Metabolomics (1435)
Genomics (27)
Other (13)
Transcriptomics (10)
Clinical (1)

Organisms

Homo sapiens (21)
Staphylococcus aureus (11)
Mus musculus (5)
Saccharomyces cerevisiae (4)
Theobroma cacao (4)
Cutibacterium acnes KPA171202 (3)
Moorena bouillonii (2)
standard reference vector pMCS (2)
Carica papaya (2)
Brittonodoxa subpinnata (2)
Streptomyces iranensis (2)
Streptomyces sp. CBMAI 2042 (2)
Streptococcus agalactiae ATCC 13813 (2)
Enterococcus faecalis (2)
Corynebacterium glutamicum (1)
Oryza sativa (1)
Nitrospirillum amazonense (1)
Pseudomonas virus PA5oct (1)
Pseudomonas aeruginosa PAO1 (1)
Rattus norvegicus (1)
Remus (1)
Ribes nigrum (1)
Amycolatopsis sp. AA4 (1)
Nepenthes ventricosa x Nepenthes alata (1)
Olea europaea (1)
Trichoderma sp. (1)
Cyanobacteriota (1)
Basidiomycota (1)
Streptomyces sp. (1)
Streptococcus pneumoniae 23F (1)

Organisms

Arabidopsis thaliana (2)
Homo sapiens (2)
Xanthomonas campestris (1)
Nitrospirillum amazonense (1)
Lysinibacillus (1)
Haliotis discus hannai (1)
Streptomyces rochei (1)
Danio rerio (1)
Raphanus sativus (1)
Rattus norvegicus (1)
Bacillus velezensis (1)
human gut metagenome (1)
Mus musculus (1)

Repository

pride (2761)
MetaboLights (1299)
MassIVE (133)
GNPS (128)
iProX (29)
ENA (27)
jPOST (16)
geo (6)
biostudies-arrayexpress (5)
NODE (5)
PanoramaPublic (5)
PeptideAtlas (4)
GPMDB (3)
MetabolomicsWorkbench (3)

Tissue

Cell culture (515)
Brain (148)
Epithelial cell (131)
Plant cell (97)
Blood plasma (88)
Permanent cell line cell (84)
Leaf (79)
Liver (74)
Blood serum (52)
Heart (45)
Whole body (45)
Kidney (45)
Blood (40)
Fibroblast (36)
Colon (36)
Cell suspension culture (35)
Saliva (35)
Macrophage (32)
Lung (30)
Root (29)
Embryo (28)
Blood cell (27)
Hepatocyte (26)
Urine (24)
Stem cell (23)
Seed (11)
Muscle (1)
T-cells (1)
Worms (1)
Seeds (1)

Disease

Disease free (69)
Breast cancer (52)
Colon cancer (32)
Alzheimer's disease (21)
Brain cancer (17)
Type 2 diabetes mellitus (14)
Acute leukemia (14)
Cardiovascular system disease (13)
Malignant neoplasm of ovary (13)
Lymphoma (12)
Cervix carcinoma (11)
Cystic fibrosis (11)
Brain glioblastoma multiforme (10)
Obesity (9)
Prostate adenocarcinoma (9)
Chagas disease (9)
Glioblastoma (9)
COVID-19 (9)
Parkinson's disease (8)
Tuberculosis (8)
Wounds and Injuries (8)
Osteosarcoma (7)
Prostate cancer (7)
Melanoma (7)
Post-traumatic stress disorder (6)
Non-small cell lung carcinoma (6)
Severe acute respiratory syndrome (6)
Not Available (3)
Malignant neoplasm of colon (1)
Diabetes (1)

Technology Type

Mass Spectrometry (2764)
Shotgun proteomics (1397)
Mass spectrometry (894)
Bottom-up proteomics (523)
Mass spectrometry assay (403)
Affinity purification coupled with mass spectrometry proteomics (312)
Data-dependent acquisition (273)
Gel-based experiment (261)
Top-down proteomics (127)
Data-independent acquisition (125)
SWATH MS (114)
HDMSE (56)
Chemical cross-linking coupled with mass spectrometry proteomics (52)
SRM/MRM (38)
MSE (36)
All-ion fragmentation (26)
DiaPASEF (15)
Mass spectrometry imaging (10)
NMR spectroscopy (9)
RNA mass spectrometry (8)
Affinity proteomics (7)
Metaproteomics (5)
Proteogenomics (5)
ESI (3)
Glycoproteomics (2)
Immunopeptidomics (2)
NMR spectroscopy assay (1)
NMR (1)
EI (1)
Sodium dodecyl sulfate polyacrylamide gel electrophoresis (1)

Instrument Platform

Q Exactive (87)
MaXis (26)
Impact HD|MS:1002667 (17)
LTQ Orbitrap Elite (10)
MicrOTOF-Q II (9)
Orbitrap Fusion (9)
6530A Q-TOF LC/MS (8)
Q Exactive Plus (7)
6520A Quadrupole Time-of-Flight LC/MS (6)
Q Exactive HF (6)
UPLC-ESI/MS (5)
Orbitrap Exploris 480 (5)
Orbitrap IQ-X (4)
TimsTOF fleX (4)
LC-ESI-QTof-MS/MS (4)
Amazon SL (Bruker Daltonics amaZon series) (4)
6560 Q-TOF LC/MS (4)
MicrOTOF-Q III (3)
6470 Triple Quadrupole LC/MS (Agilent instrument model) (2)
Agilent software|1000689 (2)
Agilent 6546 Q-TOF MS dual AJS ESI mass spectrometer (2)
Easy n-LC and LTQ Orbitrap XL mass spectrometers (both from Thermo Fisher, San Jose, CA, USA) (2)
Nano-electrospray source, were used for nano LC-MS/MS (2)
DART-TOF-MS and LC-ESI-QTOF (2)
HPLC-MS ESI low resolution (Thermo-Fischer) (2)
6546 Q-TOF LC/MS (Agilent instrument model) (2)
Agilent 1290 Infinity II HPLC system coupled to a qTOF 6550 ESI\/MS (1)
Agilent 1290 Infinity II LC System (Agilent Technologies) coupled with a qTOF 6550 mass detector (1)
TEMPUS TOF (1)
Orbitrap Q Exactive HF (1)

Publication Date

2025 (739)
2026 (669)
2024 (491)
2022 (466)
2023 (429)
2021 (362)
2020 (312)
2019 (234)
2018 (208)
2017 (159)
2016 (119)
2015 (71)
2014 (58)
2013 (14)
2012 (5)
2009 (3)
2006 (3)
2008 (1)
2027 (1)
2010 (1)

UNIPROT ID/AC

Q921C1 (2)
P03899 (2)
E9PXG1 (2)
Q9JKF6 (2)
Q99PU5 (2)
Q99JP6-2 (2)
Q8R191 (2)
Q8CHX7 (2)
Q8CA95-3 (2)
Q8C8N2 (2)
Q8BLE7 (2)
Q8BG39 (2)
Q80XD3 (2)
Q80U23 (2)
Q80T41 (2)
Q7TPM6 (2)
Q6XE40 (2)
Q60771 (2)
Q50DZ7 (2)
Q3V1R3 (2)
Q3UHL1 (2)
Q3UHJ2 (2)
Q3TZE2 (2)
Q3TYL3 (2)
Q3TXX4 (2)
Q3KN99 (2)
Q1MXF8 (2)
P31650 (2)
P23242 (2)
O35316 (2)

ENSEMBL ID

ENSMUSP00000141097 (2)
ENSMUSG00000072849 (1)
ENSMUSG00000098557 (1)

CHEBI ID

CHEBI:16704 (218)
CHEBI:17368 (210)
CHEBI:30769 (203)
CHEBI:16335 (203)
CHEBI:15891 (195)
CHEBI:16708 (193)
CHEBI:17596 (189)
CHEBI:16750 (184)
CHEBI:17750 (176)
CHEBI:17568 (174)
CHEBI:17154 (173)
CHEBI:15354 (171)
CHEBI:16919 (170)
CHEBI:17562 (170)
CHEBI:27897 (167)
CHEBI:28044 (166)
CHEBI:7916 (161)
CHEBI:6650 (159)
CHEBI:30915 (159)
CHEBI:16040 (153)
CHEBI:16737 (153)
CHEBI:32816 (151)
CHEBI:18211 (151)
CHEBI:15428 (150)
CHEBI:29016 (149)
CHEBI:15741 (147)
CHEBI:16235 (147)
CHEBI:17015 (144)
CHEBI:18132 (144)
CHEBI:17533 (143)

Metabolite Name

Hypoxanthine (244)
Adenosine (206)
Adenine (206)
Uracil (204)
Uridine (204)
Creatine (198)
Inosine (184)
Betaine (182)
Creatinine (177)
Taurine (177)
Guanosine (174)
L-Phenylalanine (173)
Xanthine (171)
Choline (169)
L-Histidine (163)
Cytosine (162)
L-Tyrosine (161)
L-Tryptophan (161)
L-Proline (160)
Guanine (154)
Cytidine (154)
Riboflavin (152)
Xanthosine (149)
Glycerophosphocholine (141)
Thymine (140)
Thymidine (139)
Azelaic acid (136)
L-Glutamine (136)
Pantothenic acid (135)
4-Hydroxybenzaldehyde (134)

First Public Date

2024 (4)
2023 (4)
2022 (4)
2020 (4)
2025 (3)
2019 (2)
2017 (2)
2026 (1)
2018 (1)
2016 (1)
2014 (1)

Modification

15.994915 (12)
42.010565 (10)
-17.026549 (9)
4-tetrahydrothiazine-3-carboxylic acid (7)
Not available (7)
45.029395 (5)
4x(15)N labeled L-arginine (5)
58.005479 (4)
4 (3)
57.021464 (3)
56.026215 (2)
59.036279 (2)
10.008269 (2)
N6 (2)
Light form - site K (1)
47.036105 (1)
788.725776 (1)
47.984744 (1)
3-dipalmitoyl-glycerol)cysteine (1)
32.056407 (1)
Heavy form - site K (1)
4'-dihydroxyphenylalanine (1)
3x(2)H labeled N6-acetyl-L-lysine (1)
-18.010565 (1)
2x(15)N labeled L-lysine (1)
N6-dimethyl-L-lysine (1)
+3amu) (1)

Study status

Recruiting (1)

Study type

Transcription profiling by array (5)
Observational (1)

Release Date

2022 (433)
2021 (422)
2023 (410)
2020 (402)
2025 (355)
2019 (347)
2024 (306)
2018 (273)
2017 (192)
2015 (152)
2016 (151)
2014 (124)
2013 (104)
2009 (70)
2012 (69)
2011 (69)
2010 (69)
2026 (52)
2008 (41)
2007 (23)
2006 (16)
2005 (8)
2004 (2)
2003 (2)

Lab affiliation

Department of Animal and Poultry Sciences and the School of Neuroscience, Virginia Tech, Blacksburg, VA, USA (21)
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (20)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (20)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic (20)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (14)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (12)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (11)
Biomolecular characterization unit, Center for Sustainable Resource Science, RIKEN (10)
North Carolina State University (9)
Molecular Biology and Biotechnology Division, ICAR-National Bureau of Fish Genetic Resources, Lucknow, Uttar Pradesh 226002, India (8)
Director, Proteome Center Rostock, University of Rostock, Germany (7)
University of Sydney (7)
Instituto de Biotecnología, Grupo de Bioquímica y Parasitología Molecular, Departamento de Parasitología, Universidad de Granada, Granada, Spain. (6)
LMU Munich Plant Biochemistry and Physiology, Germany (6)
Department of Entomology,Institute of Vegetables and Flowers,Chinese Academy of Agriculture Sciences,Beijing,100081,China (6)
University Clinic for Poultry and Fish Medicine, University of Veterinary Medicine, Vienna, Austria (6)
Institute of Microbiology - BioCeV, Academy of Sciences of the Czech Republic (6)
Medical Proteomics Unit, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand (6)
Erasmus MC (6)
IFOM (6)
Indiana University School of Medicine (6)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and Signalling Research Centres BIOSS and CIBSS, University of Freiburg, 79104 Freiburg im Breisgau, Germany (5)
The Forsyth Institute (5)
CRUK Scotland Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (5)
Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, 9220 Aalborg E, Denmark (5)
Fraunhofer Institute for Molecular Biology and Applied Ecology IME Auf dem Aberg 1 | 57392 Schmallenberg | Germany (5)
Texas Tech University (5)
Chair of Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, Würzburg, Germany (5)
Proteomics of Stem Cells and Cancer, German Cancer Research Center (DKFZ), Heidelberg, Germany (5)
Universität Greifswald Institut für Pharmazie, AG Pharmazeutische Biotechnologie Greifswald, Germany (5)

Location

Germany (1)

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