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TranscriptomicsTranscription profiling of yeast mutant strains vs WT: YIA29 (mdl1::HIS3); YIA30 (yme1::KAN); YIA31 (mdl1::HIS3 yme1::KAN);
All yeast strains were in the genetic background W303-1A (MATa leu2-3,112 trp1-1 ura3-1 can1-100 ade2-1 his3-11,15). Gene expression profiles of the following mutant strains were compared with WT: YIA29 (mdl1::HIS3); YIA30 (yme1::KAN); YIA31 (mdl1::HIS3 yme1::KAN); 2 independent RNA preparations per...
ORGANISM(S): Saccharomyces cerevisiae 
2005-12-31 | E-EMBL-5 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wild type G. sulfurreducens DL1 strain and mutant delta-sfrAB::kan, acetate-adapted strain using fumarate as an electron acceptor
1. Summary: SfrAB, the soluble ferric reductase of Geobacter sulfurreducens, is a two subunit complex that can catalyze the NADPH-dependent reduction of chelated Fe(III) and is encoded in a two gene cluster in which the sfrB gene (GSU_0510) is 126 bp upstream of the sfrA gene (GSU_0509)[Kaufmann an...
ORGANISM(S): Geobacter sulfurreducens 
2008-01-03 | E-TIGR-130 | biostudies-arrayexpress
TranscriptomicsKANADI1-regulated genes in shade
RNA-Seq of Arabidopsis thaliana Col-0 and 35S::FLAG-GR-KAN1 plants grown in ambient light or shade. 8 samples (Col-0 wildtype, 35S::FLAG-GR-KAN1 each in shade or ambient light, each with mock or Dexamethasone treatment) with two technical replicates were sequenced.
ORGANISM(S): Arabidopsis thaliana 
2015-08-11 | E-GEOD-68684 | biostudies-arrayexpress
TranscriptomicsS. coelicolor LY2517 R5- medium time course study (Culture # 1)
Antibiotic biosynthesis in Streptomyces species is controlled by a complex genetic and biochemical network of global and pathway specific regulators. Details of their precise interactions in mediating temporal and spatial expression of secondary metabolite genes remain poorly defined. In this study,...
ORGANISM(S): Streptomyces coelicolor 
2012-12-19 | E-GEOD-21809 | biostudies-arrayexpress
TranscriptomicsS. coelicolor LY2517 R5- medium time course study (Culture # 2)
Antibiotic biosynthesis in Streptomyces species is controlled by a complex genetic and biochemical network of global and pathway specific regulators. Details of their precise interactions in mediating temporal and spatial expression of secondary metabolite genes remain poorly defined. In this study,...
ORGANISM(S): Streptomyces coelicolor 
2012-12-19 | E-GEOD-21810 | biostudies-arrayexpress
TranscriptomicsS. coelicolor WL6268 R5- medium time course study
Antibiotic biosynthesis in Streptomyces species is controlled by a complex genetic and biochemical network of global and pathway specific regulators. Details of their precise interactions in mediating temporal and spatial expression of secondary metabolite genes remain poorly defined. In this study,...
ORGANISM(S): Streptomyces coelicolor 
2010-10-25 | E-GEOD-21808 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wild type G. sulfurreducens DL1 strain and mutant RelA (relGsu::kan) using fumarate as an electron acceptor
This experiment tests the gene expression of the RelA mutant (ORF03691/GSU2236) versus wild type G. sulfurreducens during log phase growth. Chemostat culture, Acetate-limiting electron donor, Fumarate electron acceptor.
ORGANISM(S): Geobacter sulfurreducens 
2007-02-15 | E-TIGR-200 | biostudies-arrayexpress
TranscriptomicsHT-project: Expression profiling after prolonged experimental febrile seizures suggests structural remodeling in the hippocampus
Febrile seizures are the most prevalent type of seizures among children up to 5 years of age (2-4% of Western-European children). Complex febrile seizures are associated with an increased risk to develop temporal lobe epilepsy. To investigate short- and long-term effects of experimental febrile seiz...
ORGANISM(S): Mus musculus 
2016-01-04 | E-GEOD-66762 | biostudies-arrayexpress
TranscriptomicsKnockdown of mitochondrial MnSOD by inducible RNAi in Arabidopsis leaves
Mitochondrial antioxidant defence was manipulated by dexamthasone inducible RNAi knockdown of the mitochondrial superoxide dismutase (MSD1) to study transcriptional changes in response.
ORGANISM(S): Arabidopsis thaliana 
2011-11-01 | E-TABM-1197 | biostudies-arrayexpress
TranscriptomicsGene expression profiles of thymic neuroendocrine tumors (carcinoids) with ectopic ACTH syndrome
Although there has been increased knowledge about the molecular biology of neuroendocrine tumors (NETs), little is known about thymic carcinoids and even less about those with excessive hormone disorders, such as ectopic ACTH syndrome. This study was designed to gain insights into molecular networks...
ORGANISM(S): Homo sapiens 
2009-08-13 | E-GEOD-17619 | biostudies-arrayexpress
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