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ProteomicsExploring the extracellular landscape of cyanobacteria with deep exoproteomics
Extracellular proteins are involved in a remarkable number of fundamental processes in cyanobacteria. Yet, there is limited knowledge regarding the identity and function of these proteins. Here, we introduce a solid-phase enhanced protein aggregation workflow that enables description of the cyanobac...
ORGANISM(S): Picosynechococcus sp. PCC 11901 Nostoc punctiforme (strain ATCC 29133 / PCC 73102) Synechocystis sp. PCC 6803 
2024-08-29 | PXD047856 | Pride
Proteomics Cyanobacteria Diapasef 
GenomicsIntegrative Genomic Analysis of Trichoderma harzianum
We used bioinformatics tools to mine the T. harzianum genome for potential genomics, transcriptomics, and exoproteomics data and coexpression networks.
PRJEB39987 | ENA
ProteomicsAdditional files for Project PXD047856 "Exploring the extracellular landscape of cyanobacteria with deep exoproteomics"
Extracellular proteins are involved in a remarkable number of fundamental processes in cyanobacteria. Yet, there is limited knowledge regarding the identity and function of these proteins. Here, we introduce a solid-phase enhanced protein aggregation workflow that enables description of the cyanobac...
ORGANISM(S): Picosynechococcus sp. PCC 11901 Nostoc punctiforme (strain ATCC 29133 / PCC 73102) Synechocystis sp. PCC 6803 
2026-01-05 | PXD072314 | Pride
Cyanobacteria Exoproteome 
Unknown"You produce while I clean up", a strategy revealed by exoproteomics during Synechococcus-Roseobacter interactions.
Not available
S-EPMC4949626 | biostudies-literature
ProteomicsEfficient utilization of plant polymers supports adaptation of bacteria to survive in bulk soil
Exoproteomics of Hopland soil isolates. Metabolic trait to efficiently utilize plant polymers provides the energy-expensive microbial adaptation to survive in low carbon availability soil.
ORGANISM(S): Unclassified Bacteria (ncbitaxon:2323) 
2019-07-01 | MSV000084044 | MassIVE
ProteomicsExoproteomics of emetic Bacillus cereus in groundwater.
This project contributes to the proteomic comparison of one asporogenic variant of emetic Bacillus cereus and its parental strain grown and harvested after 24 and 72h incubation in groundwater.
ORGANISM(S): Bacillus cereus AH187 
2022-04-23 | PXD018955 | Pride
Emetic bacillus cereus Bacteria Shotgun proteomics Groundwater Asporogenic variant 
UnknownGlucose-Mediated Repression of Plant Biomass Utilization in the White-Rot Fungus Dichomitus squalens.
Not available
S-EPMC6856337 | biostudies-literature
Unknown"Integrative genomic analysis of the bioprospection of regulators and accessory enzymes associated with cellulose degradation in a filamentous fungus (Trichoderma harzianum)".
Not available
S-EPMC7607812 | biostudies-literature
UnknownComparative genomic, proteomic and exoproteomic analyses of three Pseudomonas strains reveals novel insights into the phosphorus scavenging capabilities of soil bacteria.
Not available
S-EPMC5082522 | biostudies-literature
ProteomicsExoproteomics of emetic Bacillus cereus grown at low and high temperature.
This project contributes to the proteomic comparison of the dynamics of emetic Bacillus cereus grown at low (16°C) and high (30°C) temperature.
ORGANISM(S): Bacillus cereus AH187 
2021-09-09 | PXD020456 | Pride
Virulence Dynamics of exoproteome. Emetic bacillus cereus Bacteria Toxins Shotgun proteomics 
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