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MetabolomicsCombining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets
Spring wheat (Triticum aestivum L.) was grown in a free-air carbon dioxide (CO2) enrichment (FACE) field experiment. Grain and biomass yield and its components were determined at maturity and the grain metabolome was analysed by gas chromatography-mass spectrometry (GC-MS) for elevated and ambient C...
2012-09-21 | MTBLS21 | MetaboLights
UnknownDECAF: Deconvoluted Extracted Ion Chromatogram-Based Quantification of Therapeutic Oligonucleotides.
Not available
S-EPMC12899511 | biostudies-literature
ProteomicsG.gallus - Vestibular epithelium, average of 3 measurements, MS1 extracted ion chromatogram and sum of MS2 intensity (Wilmarthetal.,scidata,2015)
abundance based on average of 3 measurements, MS1 extracted ion chromatogram and sum of MS2 intensity, Interaction consistency score: 9.5, Coverage: 6
ORGANISM(S): 9031 
2015-00-00 | 4165817846 | PAXDB
ProteomicsM.musculus - Vestibular epithelium, average of 2 measurements, MS1 extracted ion chromatogram and sum of MS2 intensity (Wilmarthetal.,scidata,2015)
abundance based on average of 2 measurements, MS1 extracted ion chromatogram and sum of MS2 intensity, Interaction consistency score: 5.7, Coverage: 3
ORGANISM(S): 10090 
2015-00-00 | 463612557 | PAXDB
ProteomicsM.musculus - Utricle epithelia, average of 2 measurements, MS1 extracted ion chromatogram and sum of MS2 intensity (Wilmarthetal.,scidata,2015)
abundance based on average of 2 measurements, MS1 extracted ion chromatogram and sum of MS2 intensity, Interaction consistency score: 9.2, Coverage: 4
ORGANISM(S): 10090 
2015-00-00 | 3996841450 | PAXDB
ProteomicsG.gallus - Utricle epithelia, average of 3 measurements, MS1 extracted ion chromatogram and sum of MS2 intensity (Wilmarthetal.,scidata,2015)
abundance based on average of 3 measurements, MS1 extracted ion chromatogram and sum of MS2 intensity, Interaction consistency score: 10.5, Coverage: 6
ORGANISM(S): 9031 
2015-00-00 | 4261425657 | PAXDB
ProteomicsQuantitative characterization of the neuropeptide level changes in dorsal horn and dorsal root ganglia regions of the murine itch models
In this study, we performed a label-free relative quantitation to identify the peptide candidates correlated with itch sensation in murine models. We tested two different itch models-the AEW model (known commonly as the dry skin model) and the MC903 model. Performed peptide extraction from the dorsa...
ORGANISM(S): Mus musculus (Mouse) 
2020-01-23 | PXD015949 | Pride
Lc-ms Extracted ion chromatogram Label-free quantitation 
ProteomicsNEK1 autophosphorylation is disrupted by amyotrophic lateral sclerosis-associated missense variants: activity biomarkers and structural insights
Rare variants in NEK1, encoding a serine/threonine kinase, are established contributors to amyotrophic lateral sclerosis (ALS), but the biochemical effects of ALS-associated NEK1 missense variants on kinase activity have not been directly investigated. This project maps the phosphorylation landscape...
ORGANISM(S): Homo sapiens (Human) 
2026-09-02 | PXD079815 | Pride
Nek1 kinase  autophosphorylation  amyotrophic lateral sclerosis  als  motor neuron disease  phosphoproteomics  phosphorylation  kinase activity  activation loop  pthr156  pser14  pser418  lc-ms/ms  hcd  ethcd  u-2 os cells  gfp immunoprecipitation  kinase-dead mutant  missense variants 
UnknownPure Ion Chromatograms Combined with Advanced Machine Learning Methods Improve Accuracy of Discriminant Models in LC-MS-Based Untargeted Metabolomics.
Not available
S-EPMC8125400 | biostudies-literature
ProteomicsGeLC-MS/MS analysis of hen egg vitelline membrane from freshly-laid eggs and eggs stored for 28 days at 4°C and 20°C
The hen egg vitelline membrane is a protein layer separating the yolk content from the egg white. The integrity of egg vitelline membrane is important for both the shell egg and the egg product industries. However, its physical properties are altered during prolonged storage, depending on storage te...
ORGANISM(S): Gallus gallus (Chicken) 
2026-03-16 | PXD066675 | Pride
Sds-page Egg Vitelline membrane Chicken Nanolc-ms/ms Storage 
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