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TranscriptomicsRNAi profiling of Arabidopsis Col-0 plants (air control), 8 week old Col-0 plants treated for 24 hours with ethylene gas (10 ppm), and artificial microRNA knockdown mutants, amiR-ETP1/2 - interplay between ethylene, ETP1/ETP2 F-box proteins, and degradation of EIN2 triggers ethylene responses in Arabidopsis
A complex interplay between ethylene, ETP1/ETP2 F-box proteins, and degradation of EIN2 is essential for triggering ethylene responses in plants. The gaseous plant hormone ethylene can trigger myriad physiological and morphological responses in plants. While many ethylene signaling pathway component...
ORGANISM(S): Arabidopsis thaliana 
2009-12-05 | E-GEOD-14247 | biostudies-arrayexpress
TranscriptomicsVFB mutant analysis
Transcript profiling analysis of vfb (Vier F-Box) mutant seedlings compared to wild type using Arabidopsis ATH1 GeneChip array.
ORGANISM(S): Arabidopsis thaliana 
2007-06-27 | E-GEOD-3863 | biostudies-arrayexpress
ProteomicsDissociation profile of F-box proteins
Dissociation rate of different F-box proteins from CUL1 was studied by AP-MS.
ORGANISM(S): Homo sapiens (Human) 
2025-01-20 | PXD045616 | Pride
Dissociation  f-box protein 
ProteomicsRBR1-E2F/DP transcriptional regulation modulated by the F-box protein FBL17
In all eukaryotes, F-box proteins of SCF E3 ligase complexes have been well-documented to control the abundance of numerous critical regulatory proteins. In Arabidopsis, one of them, F-BOX-LIKE17 (FBL17), stands out for playing a key role in DNA replication, DNA damage and more recently for the cont...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2026-02-23 | PXD063507 | Pride
Cell cycle E2f/rbr Ubiquitin Plant F-box 
ProteomicsTransposable elements drive regulatory and functional innovation of F box genes
Protein domains of transposable elements (TEs) and viruses increase the protein diversity of host genomes by recombining with other protein domains. By screening 10 million eukaryotic proteins, we identified several domains that define multi-copy gene families and frequently co-occur with TE/viral d...
ORGANISM(S): Caenorhabditis elegans 
2024-12-16 | PXD048290 | Pride
Lc-ms/ms 
TranscriptomicsTranscription profiling of Arabidopsis AtFBP7 mutant and wild type seedings
Transcript profiling analysis of AtFBP7 mutant seedlings compared to wild type using Arabidopsis ATH1 GeneChip array.
ORGANISM(S): Arabidopsis thaliana 
2007-06-27 | E-GEOD-3864 | biostudies-arrayexpress
OtherA systems-wide screen identifies substrates of the SCF-beta-TrCP ubiquitin ligase.
Data from ProteomeXchange, PXD ID: PXD001224. File: OR3_100623_BTrCP_EV_IP_Band01.mzml. Published as part of Sci Signal. 2014 Dec 16;7(356):rs8 . From the Abstract: {{i}} ... We developed a combined bioinformatics and affinity purification-mass spectrometry (AP-MS) workflow for the system-wide iden...
ORGANISM(S): Homo_sapiens_viruses, Human_female 
GPM32320006530 | GPMDB
Resource Reanalysis 
ProteomicsSynergy between a cytoplasmic vWFA/VIT protein and a WD40-repeat F-box protein controls development in the social amoeba Dictyostelium (FbxwD IP)
Like most eukaryotes, the pre-metazoan social amoeba Dictyostelium depends on the SCF (Skp1/cullin-1/F-box protein) family of E3 ubiquitin ligases to regulate its proteome. In Dictyostelium, starvation induces a transition from unicellular feeding to a multicellular slug that responds to external si...
ORGANISM(S): Dictyostelium discoideum (Slime mold) 
2023-10-24 | PXD035633 | Pride
Glycosylation Von willebrand domain a Vfwa Skp1 Ring Cellular slime mold F-box protein E3(scf)ubiquitin-ligase Vit 
ProteomicsSynergy between a cytoplasmic vWFA/VIT protein and a WD40-repeat F-box protein controls development in the social amoeba Dictyostelium (Vwa1 IP)
Like most eukaryotes, the pre-metazoan social amoeba Dictyostelium depends on the SCF (Skp1/cullin-1/F-box protein) family of E3 ubiquitin ligases to regulate its proteome. In Dictyostelium, starvation induces a transition from unicellular feeding to a multicellular slug that responds to external si...
ORGANISM(S): Dictyostelium discoideum (Slime mold) 
2023-10-24 | PXD035634 | Pride
Glycosylation Von willebrand domain a Vfwa Skp1 Ring Cellular slime mold F-box protein E3(scf)ubiquitin-ligase Vit 
ProteomicsThe Arabidopsis F-box protein FBW2 degrades AGO1 to avoid spurious loading of illegitimate small RNA
RNA silencing is a conserved mechanism in eukaryotes and is involved in development, heterochromatin maintenance and defense against viruses. In plants, ARGONAUTE1 (AGO1) protein plays a central role in both microRNA (miRNA) and small interfering RNA (siRNA)-directed silencing and its expression is ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-04-01 | PXD024840 | Pride
Scf complex Rna silencing F-box protein fbw2 Ago1 
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