Feng Di D - OmicsDI

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Unknown (203)
Transcriptomics (87)
Proteomics (17)
Genomics (14)
Metabolomics (9)
Multiomics (1)

Organisms

Homo sapiens (48)
Mus musculus (23)
Arabidopsis thaliana (5)
Candida albicans (3)
Rattus norvegicus (3)
Oryza sativa (2)
Spalax carmeli (1)
Populus cathayana (1)
Beauveria bassiana ARSEF 2860 (1)
Beauveria bassiana (1)
Metarhizium acridum (1)
Oryza longistaminata (1)
Cunninghamia lanceolata (1)
Culex quinquefasciatus (1)
Bemisia tabaci (1)
Gossypium hirsutum (1)
Leishmania mexicana (1)
Macaca mulatta (1)
Brassica rapa (1)
Equus caballus (1)
Streptococcus suis (1)
Brassica oleracea var. italica (1)
Pseudomonas aeruginosa PAO1 (1)
Glycine max (1)
Caenorhabditis elegans (1)
Gallus gallus (1)
Saccharomyces cerevisiae (1)
Drosophila melanogaster (1)
Danio rerio (1)
Elaphe taeniura (1)

Repository

biostudies-arrayexpress (101)
iProX (10)
MetaboLights (8)
MassIVE (4)
pride (3)
GNPS (1)

Tissue

Leaf (1)
Lung (1)
Mycelium (1)

Disease

Acute lymphocytic leukemia (1)

Technology Type

Mass spectrometry (8)
Mass Spectrometry (3)
Shotgun proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

BGISEQ-500 (5)
Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (3)
Illumina HiSeq 2500 (2)
Illumina HiSeq 2000 (2)
Q Exactive (2)
UPLC Q-TOF Premier (Waters) (2)
University College Dublin Animal Research Ethics Committee approval, a licence from the Department of Health (B100/3525) and explicit owner/trainer informed consent were obtained for the use of all horses and procedures in this study. (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
LTQ Orbitrap (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion ETD (1)
Q Exactive HF-X (1)
Q Exactive Plus (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
MS Imaging - (1)

Publication Date

2014 (21)
2012 (15)
2015 (11)
2011 (11)
2013 (10)
2022 (7)
2016 (6)
2010 (6)
2009 (6)
2024 (5)
2025 (4)
2021 (4)
2008 (4)
2007 (3)
2023 (3)
2026 (2)
2020 (2)
2019 (2)
2017 (2)
2005 (1)
2018 (1)

CHEBI ID

CHEBI:30769 (4)
CHEBI:16108 (3)
CHEBI:17687 (3)
CHEBI:18012 (3)
CHEBI:27471 (3)
CHEBI:30915 (3)
CHEBI:48928 (3)
CHEBI:6650 (3)
CHEBI:78697 (3)
CHEBI:116314 (2)
CHEBI:12962 (2)
CHEBI:14314 (2)
CHEBI:15040 (2)
CHEBI:15318 (2)
CHEBI:15414 (2)
CHEBI:15553 (2)
CHEBI:15558 (2)
CHEBI:15727 (2)
CHEBI:15729 (2)
CHEBI:15741 (2)
CHEBI:15756 (2)
CHEBI:15760 (2)
CHEBI:15889 (2)
CHEBI:15971 (2)
CHEBI:15978 (2)
CHEBI:16015 (2)
CHEBI:16020 (2)
CHEBI:16026 (2)
CHEBI:16027 (2)
CHEBI:16031 (2)

Metabolite Name

Citrate (2)
Fumarate (2)
Glycodeoxycholic acid (GDCA) (2)
Malate (2)
Succinate (2)
(+ (1)
(+)-Pinoresinol (1)
(+)-Prosopinine (1)
(-)-Acanthocarpan (1)
(-)-Glyceollin I (1)
(-)-Menthyl O-beta-D-glucoside (1)
(1-Ribosylimidazole)-4-acetate (1)
(10S)-Juvenile hormone III acid diol (1)
(10S)-Juvenile hormone III diol (1)
(15S)-15-Hydroxy-5,8,11-cis-13-trans-eicosatetraenoate (1)
(2'S)-Deoxymyxol 2'-(2,4-di-O-methyl-alpha-L-fucoside) (1)
(2'S)-Deoxymyxol 2'-alpha-L-fucoside (1)
(2S,3S)-2-Hydroxytridecane-1,2,3-tricarboxylate (1)
(3R,2'S)-Myxol 2'-(2,4-di-O-methyl-alpha-L-fucoside) (1)
(3S,2'S)-4-Ketomyxol 2'-alpha-L-fucoside (1)
(3S,4S)-3-Hydroxytetradecane-1,3,4-tricarboxylate (1)
(3Z)-Phycocyanobilin (1)
(3alpha,5beta,11beta,17beta)-9-Fluoro-17-methylandrostane-3,11,17-triol (1)
(5Z,13E)-11alpha-Hydroxy-9,15-dioxoprost-13-enoate (1)
(6R)-10-Formyltetrahydropteroyldiglutamate (1)
(6Z,9Z,12Z)-Octadecatrienoic acid (1)
(9R,10R)-Dihydroxyoctadecanoic acid (1)
(9S,10S)-10-Hydroxy-9-(phosphonooxy)octadecanoate (1)
(9Z)-(13S)-12,13-Epoxyoctadeca-9,11-dienoic acid (1)
(9Z)-(7S,8S)-Dihydroxyoctadecenoic acid (1)

Study type

Transcription profiling by array (52)
RNA-seq of coding RNA (17)
ChIP-seq (9)
Comparative genomic hybridization by array (4)
RNA-seq of non coding RNA (4)
Other (3)
DNA-seq (3)
Unknown experiment type (2)
Methylation profiling by high throughput sequencing (2)
ChIP-chip by tiling array (1)
Plant - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
Methylation profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2022 (28)
2025 (27)
2024 (27)
2021 (26)
2014 (25)
2023 (21)
2020 (19)
2012 (16)
2018 (14)
2019 (13)
2013 (13)
2015 (12)
2011 (12)
2016 (10)
2017 (10)
2009 (8)
2008 (7)
2010 (6)
2026 (4)
2007 (4)
2005 (1)
2000 (1)

Lab affiliation

Agronomy College, Henan Agricultural University, China (1)
College of Life Sciences, Zhejiang University, China (1)
Department of Integration of Chinese and Western Medicine, School of Basic Medical Sciences, Peking University, 38 Xueyuan Road, Beijing 100191, People’s Republic of China (1)

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Rattus norvegicus lung LC-MS/MS

Male Sprague-Dawley rats were used to establish exhausted-exercise model by motorized rodent treadmill. Yu-Ping-Feng-San at doses of 2.18 g/kg was administrated by gavage before exercise training for 10 consecutive days. Quantitative proteomics was performed for assessing the related mechanism of Yu...

ORGANISM(S): Rattus norvegicus (Rat)

2022-08-12 | PXD032737 | Pride

Transcripts regulated by elevated DKF-2 (WT background)

Transcriptional profiling was used to determine why DKF-2 (protein kinase D) deficiency and surfeit caused hypersensitivity and resistance, respectively, to a bacterial pathogen (P. aeruginosa 14). The studies show that DKF-2 contributes to C. elegans innate immunity by inducing expression of >75 ge...

ORGANISM(S): Caenorhabditis elegans

2009-01-12 | E-GEOD-12456 | biostudies-arrayexpress

Synthesis and degradation of the cyclic dinucleotide messenger c-di-AMP in the hyperthermophilic archaeon Pyrococcus yayanosii.

Not available

S-EPMC10680344 | biostudies-literature

Crystallization and X-ray diffraction analysis of native and selenomethionine-substituted PhyH-DI from Bacillus sp. HJB17.

Not available

S-EPMC5683030 | biostudies-literature

Exposure Characteristics and Cumulative Risk Assessment for Phthalates in Children Living near a Petrochemical Complex.

Not available

S-EPMC9865072 | biostudies-literature

Salmonella Typhimurium reprograms macrophage metabolism via T3SS effector SopE2 to promote intracellular replication and virulence

Salmonella Typhimurium establishes systemic infection by replicating in host macrophages. Here we show that macrophages infected with S. Typhimurium exhibit upregulated glycolysis and decreased serine synthesis, leading to accumulation of glycolytic intermediates. The effects on...

2024-05-22 | MTBLS2347 | MetaboLights

Insights into the molecular basis of tick-borne encephalitis from multiplatform metabolomics.

Not available

S-EPMC7984639 | biostudies-literature

Utilization of metabolomics to identify serum biomarkers for hepatocellular carcinoma in patients with liver cirrhosis

Characterizing the metabolic changes pertaining to hepatocellular carcinoma (HCC) in patients with liver cirrhosis is believed to contribute towards early detection, treatment, and understanding of the molecular mechanisms of HCC. In this study, we compare metabolite levels in sera of 78 HCC cases w...

MTBLS17 | MetaboLights

Ferritinophagy-Mediated Ferroptosis and Activation of Keap1/Nrf2/HO-1 Pathway Were Conducive to EMT Inhibition of Gastric Cancer Cells in Action of 2,2'-Di-pyridineketone Hydrazone Dithiocarbamate Butyric Acid Ester.

Not available

S-EPMC8885181 | biostudies-literature

Genome-wide association studies of plant architecture-related traits and 100-seed weight in soybean landraces.

Not available

S-EPMC7937308 | biostudies-literature

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330 Results

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