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TranscriptomicsTfap2a dependnt cha
Neo/null loss of Tfap2a in E10.5 mouse facial prominences triplicate run comparing tissue dissected from the nasal, maxillary and mandibular comparing AP-2 mutant and control embryos
ORGANISM(S): Mus musculus 
2014-08-05 | E-GEOD-60058 | biostudies-arrayexpress
TranscriptomicsTargeting Unique Metabolic Properties of Breast Tumor Initiating Cells
Bulk cancer cell populations are known to display distinct metabolic properties compared to their normal counterparts. However, relatively little is known about heterogeneity of metabolic properties within tumors. In this study we show that, analogous to some normal stem cells, breast tumor initiati...
ORGANISM(S): Mus musculus 
2014-07-31 | E-GEOD-41286 | biostudies-arrayexpress
TranscriptomicsEctoderm and mesenchyme gene expression in the developing mouse face
This investigation provides a robust multi-dimensional compendium of gene expression data relevant to mouse facial development. It profiles the transcriptome ofectoderm and mesenchyme from the three facial prominences in a time series encompassing their growth and fusion. Analysis of the dataset ide...
ORGANISM(S): Mus musculus 
2014-10-10 | E-GEOD-62214 | biostudies-arrayexpress
TranscriptomicsHuman mesenchymal stem cells at 24 hours and 0.5% O2, gene expression and exon array, three independent biological replicates
Multipotent bone marrow-derived mesenchymal stem cells (MSCs) represent a promising cell source for autologous transplantation in many human diseases. To better realize their in vivo therapeutic potential, hypoxia preconditioning has become a novel strategy to improve the survival, migration, and an...
ORGANISM(S): Homo sapiens 
2011-11-11 | E-GEOD-32006 | biostudies-arrayexpress
TranscriptomicsRobust enumeration of cell subsets from tissue expression profiles (HGU133A)
We introduce CIBERSORT, a method for characterizing cell composition of complex tissues from their gene expression profiles. When applied to enumeration of hematopoietic subsets in RNA mixtures from fresh, frozen, and fixed tissues, including solid tumors, CIBERSORT outperformed other methods with r...
ORGANISM(S): Homo sapiens 
2015-03-29 | E-GEOD-65134 | biostudies-arrayexpress
TranscriptomicsRobust enumeration of cell subsets from tissue expression profiles (BeadChip)
We introduce CIBERSORT, a method for characterizing cell composition of complex tissues from their gene expression profiles. When applied to enumeration of hematopoietic subsets in RNA mixtures from fresh, frozen, and fixed tissues, including solid tumors, CIBERSORT outperformed other methods with r...
ORGANISM(S): Homo sapiens 
2015-03-29 | E-GEOD-65133 | biostudies-arrayexpress
TranscriptomicsThe gene expression pattern of bone marrow mesenchymal stem cells from patients with psoriasis
Object: To study the difference of gene expression pattern of bone marrow mesenchymal stem cells (BMMSCs) between psoriatic patients, normal adults and aborted fetuses, and then to explore the influence of bone marrow mesenchymal stem cells to immune system. Methods: Bone marrow mononuclear cells (B...
ORGANISM(S): Homo sapiens 
2012-08-10 | E-GEOD-40033 | biostudies-arrayexpress
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