Few-cell proteomics

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Proteomics (435)
Unknown (402)
Genomics (38)
Transcriptomics (30)
Other (9)
Multiomics (1)
Metabolomics (1)

Organisms

Homo sapiens (41)
Mus musculus (16)
Rhodospirillum rubrum (4)
Bacillus subtilis subsp. subtilis str. 168 (1)
Xenopus laevis (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Rhodospirillum rubrum ATCC 11170 (1)
Candida albicans (1)
Macaca mulatta (1)
Arabidopsis thaliana (1)
Rattus norvegicus (1)
1804623 (1)
Akebia trifoliata (1)
Apis mellifera (1)
Bacillus pumilus (1)
Glycine max (1)
Homo (1)
Ketogulonicigenium vulgare (1)
Klebsiella variicola UCI 18 (1)
Ovis aries (1)
Phoca largha (1)
Pseudoalteromonas sp. A3 (1)
Pyricularia oryzae P131 (1)
Staphylococcus aureus (1)
Staphylococcus warneri (1)
Takifugu obscurus (1)
Triticum aestivum/Septoria tritici mixed cDNA library (1)
fungal sp. NT-01 (1)
Escherichia coli (1)
Danio rerio (1)

Organisms

Homo sapiens (18)
Mus musculus (6)
Rhodospirillum rubrum (1)
Xenopus laevis (1)
Macaca mulatta (1)
Candida albicans (1)
Bacillus subtilis subsp. subtilis str. 168 (1)
Arabidopsis thaliana (1)
Rattus norvegicus (1)

Repository

pride (341)
MassIVE (43)
ENA (34)
iProX (31)
geo (25)
biostudies-arrayexpress (16)
jPOST (8)
PanoramaPublic (4)
PAXDB (4)
GPMDB (3)
PeptideAtlas (3)
MetaboLights (1)

Tissue

Cell culture (85)
Epithelial cell (29)
Permanent cell line cell (20)
T cell (12)
B cell (11)
Brain (9)
Lung (9)
Blood cell (8)
Cell suspension culture (7)
Heart (7)
Fibroblast (6)
Kidney (6)
Liver (6)
Blood plasma (5)
Embryo (5)
Pancreas (5)
Skin (5)
Blood (4)
Blood serum (4)
Lymph node (4)
Oocyte (4)
Root (4)
Spleen (4)
Breast cancer cell (3)
Breast cancer cell line (3)
Cell line cell (3)
Colon (3)
Embryonic stem cell (3)
HeLa cell (3)
Others (1)

Disease

Breast cancer (13)
Malignant neoplasm of ovary (7)
Melanoma (7)
Acute lymphocytic leukemia (4)
Colon cancer (4)
Disease free (4)
Lung adenocarcinoma (4)
Lung cancer (4)
Non-small cell lung carcinoma (4)
Pancreatic cancer (4)
Not Available (3)
Acute leukemia (3)
Brain cancer (3)
Influenza (3)
Alzheimer's disease (2)
Brain glioblastoma multiforme (2)
Chronic lymphocytic leukemia (2)
Chronic myeloid leukemia (2)
Endometrial cancer (2)
Lung small cell carcinoma (2)
Lymphoma (2)
Prostate adenocarcinoma (2)
Psoriasis (2)
Locally advanced rectal cancer (1)
Normal (1)
Adenocarcinoma (1)
Adult liposarcoma (1)
Burkitt lymphoma (1)
COVID-19 (1)
Nipah virus encephalitis (1)

Technology Type

Mass Spectrometry (341)
Shotgun proteomics (204)
Bottom-up proteomics (52)
Affinity purification coupled with mass spectrometry proteomics (39)
Gel-based experiment (25)
Data-independent acquisition (20)
Data-dependent acquisition (19)
Top-down proteomics (15)
SWATH MS (10)
SRM/MRM (5)
All-ion fragmentation (3)
Immunopeptidomics (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Mass spectrometry assay (1)
Glycoproteomics (1)
HDMSE (1)
MSE (1)
Metaproteomics (1)

Instrument Platform

Q Exactive (10)
Orbitrap Fusion Lumos (6)
LTQ Orbitrap Elite (4)
Q Exactive HF-X (4)
LTQ Orbitrap Velos (4)
Instrument (3)
Orbitrap Fusion (3)
Q Exactive Plus (3)
TripleTOF 5600 (3)
Q Exactive HF (2)
TripleTOF 6600 (2)
LTQ (2)
Bruker Daltonics instrument model (1)
LTQ Orbitrap (1)
LTQ/Orbitrap Velos (1)
Orbitrap Eclipse (1)
Q-Exactive HF (QE) Quadrupole-Obitrap mass spectrometer (1)
TSQ Quantum (1)
Thermo Dionex UltiMate 3000 RSLC nano system (1)
Thermo Q-Exactive HF (QE) Quadrupole-Obitrap mass spectrometer (1)
Liquid Chromatography MS - negative - hilic (1)
LTQ Orbitrap XL (1)
Unknown (1)

Publication Date

2022 (72)
2021 (53)
2023 (50)
2024 (47)
2025 (44)
2026 (35)
2020 (32)
2018 (31)
2019 (27)
2017 (20)
2016 (14)
2015 (10)
2013 (10)
2010 (7)
2014 (6)
2012 (3)
2011 (3)
2009 (2)
2003 (2)
2008 (1)
2006 (1)

UNIPROT ID/AC

1433B_MOUSE (2)
1433E_MOUSE (2)
1433F_MOUSE (2)
1433G_MOUSE (2)
1433T_MOUSE (2)
1433Z_MOUSE (2)
2A5D_YEAST (2)
2AAA_MOUSE (2)
2AAA_YEAST (2)
2AAB_MOUSE (2)
3HAO_YEAST (2)
3HIDH_MOUSE (2)
4932.YDL191W (2)
4932.YDR025W (2)
4932.YEL054C (2)
4932.YER102W (2)
4932.YER117W (2)
4932.YGR161W-A (2)
4932.YIL018W (2)
4932.YIL069C (2)
4932.YJR145C (2)
4932.YKR059W (2)
4932.YKR094C (2)
4932.YML026C (2)
4932.YOL120C (2)
4932.YOR133W (2)
4932.YOR182C (2)
4932.YOR312C (2)
4932.YPL220W (2)
4932.YPR043W (2)

Metabolite Name

N2-Succinyl-glutamic acid (1)
C5H7NO3 (1)
C5H8N2O5 (1)
C11H18N3O6 - Ophthalmic acid ? (1)
N-Acetylglucosamine phosphate (1)
C5H8O5 (1)
Citra/Gluta/Ita-conic acid 1 (1)
C4H6O4 - diacid (1)
C14H17N5O8 (N6-succinyladenosine ?) (1)
C5H9NO3 (1)
C6H11NO3 (1)
C7H11NO6 (1)
C6H8O6 (1)
C5H8O2 (1)
Methylaconitate isomer 4 (1)
3-Amino(iso)butanoic acid (1)
Methylaconitate isomer 3 (1)
C9H9NO4 (1)
Methylaconitate isomer 2 (1)
C7H10O5 (1)
Acetylneuraminic acid isomer 2 (1)
Methylaconitate isomer 1 (1)
Sucrose or C12H22O11 isomer (1)
C5H10O6 - Arabinonic acid ? (1)
C4H8O5 (1)
C7H12O4 (1)
C8H14O5 (1)
C8H11NOS - Dopamine-4-O-sulfate ? (1)
C10H11N4O6 - Xanthosine (1)
C6H10O5 (1)

First Public Date

2025 (10)
2014 (6)
2018 (4)
2013 (3)
2026 (2)
2024 (2)
2023 (2)
2022 (2)
2021 (1)
2017 (1)
2015 (1)

Classification

fungi (1)

Modification

N6 (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (9)
RNA-seq of coding RNA (3)
ChIP-seq (2)
Other (1)
Proteomic profiling by array (1)

Release Date

2021 (49)
2023 (38)
2022 (38)
2025 (29)
2016 (29)
2015 (27)
2024 (26)
2019 (24)
2020 (23)
2014 (23)
2017 (20)
2018 (18)
2013 (17)
2010 (15)
2012 (11)
2009 (10)
2008 (8)
2011 (7)
2026 (3)
2007 (1)
2005 (1)
2001 (1)

Lab affiliation

Institute for Research in Immunology and Cancer, Department of Biochemistry, Department of Chemistry, Université de Montréal, Québec, Canada H3T 1J4 (10)
Cancer Biology Department, Fox Chase Cancer Center, Philadelphia, PA, USA (3)
MRC Toxicology Unit, University of Cambridge (3)
University of Edinburgh (3)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (2)
Biozentrum, University of Basel, 4056 Basel, Switzerland (2)
Brown University, MCB Department (2)
Competence Center of Food and Fermentation Technology (2)
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (2)
Dept. of Molecular Biosciences, University of Texas at Austin, Texas 78712 USA (2)
Director, Centre for Proteome Research Department of Biochemistry & Systems Biology Institute of Systems, Molecular & Integrative Biology University of Liverpool Crown Street, Liverpool L69 7ZB +44 151 795 4424 (2)
Div. Clinical Protein Science and Imaging, Dept. of Clinical Sciences and Dept. of Biomedical Engineering, Lund University, Sweden (2)
Division of Clinical Protein Science & Imaging, Department of Clinical Sciences (Lund), Department of Biomedical Engineering, Lund University, Lund, Sweden (2)
EDyP (2)
Institute of Biophysics, Chinese Academy of Sciences (2)
National Heart and Lung Institute, Imperial College London, United Kingdom (2)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (2)
Wayne State University Chemistry (2)
.L. Talrose Institute for Energy Problems of Chemical Physics, N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Leninsky Pr. 38, Bld.2, 119334, Moscow, Russia (1)
1 Department of Genetics, Harvard Medical School, Boston, MA 02115 (1)
1 IBMC-Institute for Molecular and Cell Biology, i3S-Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal 2 ICBAS-School of Medicine and Biomedical Sciences, Universidade do Porto, Porto, Portugal (1)
1,College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi 712100, China 2,Key Laboratory of Animal Biotechnology, Ministry of Agriculture, Northwest A&F University, Yangling, Shaanxi 712100, China (1)
1. Research Institute for Medical and Health Sciences, University of Sharjah, Sharjah, United Arab Emirates. 2. College of Pharmacy, Department of Medicinal Chemistry, University of Sharjah, United Arab Emirates (1)
1Cancer Institute, the Second Affiliated Hospital, and Institute of Translational Medicine, Zhejiang University School of Medicine, Hangzhou 310029, China 2Cancer Center, Zhejiang University, Hangzhou 310058, China 3Research Center for Life Science and Human Health, Binjiang Institute of Zhejiang University, Hangzhou 310053, China (1)
1Université Libre de Bruxelles, Laboratory of Stem Cells and Cancer, Brussels B-1070, Belgium. 2WELBIO, Université Libre de Bruxelles, Brussels B-1070, Belgium (1)
ARC Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia (1)
Aalborg University Fredrik Bajers Vej 7H 9220 Aalborg Denmark (1)
Aix-Marseille Université, CNRS, INSERM, Institut Paoli-Calmettes (1)
Associate Professor, Center for Genomics and Systems Biology, Dept of Biology, New York University (1)
Austrian Centre of Industrial Biotechnology (ACIB), Petersgasse 14, 8010 Graz, Austria; Medical University of Graz, Institute of Pathology, Research Unit Functional Proteomics and Metabolic Pathways, Stiftingtalstrasse 24, 8010 Graz, Austria; Omics Center Graz, BioTechMed-Graz, Stiftingtalstrasse 24, 8010 Graz, Austria. (1)

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A Novel LC System Embeds Analytes in Pre-formed Gradients for Rapid, Ultra-robust Proteomics.

Not available

S-EPMC6210218 | biostudies-literature

Nanoparticle-aided nanoreactor for large-scale proteomics of few mammalian cells

Large-scale bottom-up proteomics of few even single cells is crucial for a better understanding of the roles played by cell-to-cell heterogeneity in disease and development. Novel proteomic methodologies with extremely high sensitivity are required for few even single-cell proteomics. Sample process...

ORGANISM(S): Homo sapiens (Human)

2022-07-11 | PXD027135 | Pride

Single and few cell analysis for correlative light microscopy, metabolomics, and targeted proteomics.

Not available

S-EPMC11318241 | biostudies-literature

Integrative proteomics of primary hepatocytes during dedifferentiation

PRJNA574425 | ENA

Defining, comparing, and improving iTRAQ quantification in mass spectrometry proteomics data.

Not available

S-EPMC3708183 | biostudies-literature

Integrative proteomics of primary hepatocytes during dedifferentiation

To understand the relationship between protein expression and mRNA translation during primary hepatocytes dedifferentiation, we have employed transcriptome microarrayas a discovery platform. Rat primary hepatocytes were isolated by the method of two-step enzymes perfusion and then cultured on mono-l...

ORGANISM(S): Rattus norvegicus

2022-09-26 | GSE138071 | GEO

SILAC-based quantitative proteomics using mass spectrometry quantifies endoplasmic reticulum stress in whole HeLa cells.

Not available

S-EPMC6899043 | biostudies-literature

hymenophyllum caudiculatum , hymenophyllum dentatum proteomics

hymenophyllum caudiculatum , hymenophyllum dentatum proteomics by 2D gel ESI MS/MS

PRJEB22971 | ENA

Integrated proximal proteomics reveals IRS2 as a determinant of cell survival in ALK-driven neuroblastoma.

Not available

S-EPMC7618099 | biostudies-literature

Formaldehyde Fixation Helps Preserve the Proteome State during Single-Cell Proteomics Sample Processing and Analysis.

Not available

S-EPMC11977542 | biostudies-literature

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915 Results

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Organisms

Repository

Tissue

Disease

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Metabolite Name

First Public Date

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