Sort   by:  
 Page size 
UnknownExperimental evidence for heat plume-induced cavitation and xylem deformation as a mechanism of rapid post-fire tree mortality.
Not available
S-EPMC5084795 | biostudies-literature
TranscriptomicsEndo-siRNAs in C. elegans spermatogenesis and their requirement for the RdRP RRF-3
Short interfering RNAs (siRNAs) are a class of regulatory effectors that enforce gene silencing though formation of RNA duplexes. While progress has been made in identifying the capabilities of siRNAs in silencing of foreign RNA and transposable elements, siRNA functions in endogenous gene regulatio...
ORGANISM(S): Caenorhabditis elegans 
2010-01-13 | E-GEOD-18429 | biostudies-arrayexpress
TranscriptomicsmRNA and Ribosome Profiling in Four Nematode Species Traversing a Shared Developmental Transition
mRNA and Ribosome Profiling in Four Nematode Species Traversing a Shared Developmental Transition mRNA-seq and Ribo-seq
ORGANISM(S): Caenorhabditis remanei 
2013-06-21 | E-GEOD-48140 | biostudies-arrayexpress
UnknownDesigning and fabricating materials from fire using sonification and deep learning.
Not available
S-EPMC8361214 | biostudies-literature
GenomicsPartitioning the C. elegans genome by nucleosome modification, occupancy, and positioning
We have characterized two post-translational histone modifications in C. elegans on a genomic scale. Micrococcal nuclease digestion and immunoprecipitation were used to obtain distinct populations of single nucleosome cores, which were analyzed using massively parallel DNA sequencing to obtain pos...
ORGANISM(S): Caenorhabditis elegans 
2009-08-31 | E-GEOD-17284 | biostudies-arrayexpress
TranscriptomicsC. elegans small RNA sequences from wild type animals fed on sel-1 dsRNA producing bacteria
RNA interference (RNAi) is a phylogenetically widespread gene silencing process triggered by doublestranded RNA (dsRNA). In plants and C. elegans, two distinct populations of small RNAs have been proposed to participate in RNAi : "Primary siRNAs" (derived from Dicer nuclease-mediated cleav...
ORGANISM(S): Caenorhabditis elegans 
2006-11-17 | E-GEOD-6282 | biostudies-arrayexpress
GenomicsAmplification of siRNA in Caenorhabditis elegans generates a transgenerational sequence-targeted histone H3 lysine 9 methylation footprint
Exogenous double-stranded RNA (dsRNA) has been shown to exert homology-dependent effects at the level of both target mRNA stability and chromatin structure. Using C. elegans undergoing RNAi as an animal model, we have investigated the generality, scope, and longevity of chromatin-targeted dsRNA effe...
ORGANISM(S): Caenorhabditis elegans 
2012-01-06 | E-GEOD-32631 | biostudies-arrayexpress
TranscriptomicsUltra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumors and matched controls
We prepared small RNA libraries from 29 tumor/normal pairs of human cervical tissue samples. Analysis of the resulting sequences (42 million in total) defined 64 new human microRNA (miRNA) genes. Both arms of the hairpin precursor were observed in twenty-three of the newly identified miRNA candidate...
ORGANISM(S): Homo sapiens 
2010-04-28 | E-GEOD-20592 | biostudies-arrayexpress
GenomicsDNA accessibility profile of three C. elegans tissues during development
We show there is minimal genome-wide chromatin rearrangements (as measured by DNA accessibility) during tissue differentiation in C. elegans transgenic expression of E. coli DAM (DNA Adenine Methyltransferase) from tissue-specific promoters followed by mapping of methylated sites using a procedure t...
ORGANISM(S): Caenorhabditis elegans 
2011-04-16 | E-GEOD-23042 | biostudies-arrayexpress
TranscriptomicsCas9 target DNA specificity in vitro and in vivo (S. cerevisiae)
Cas9, a CRISPR RNA-guided nuclease, has been rapidly adopted as a tool for biochemical and genetic manipulation of DNA. Although Cas9 offers remarkable specificity and versatility for genome manipulation, mis-targeted events occur. To extend the understanding of Cas9 target::homology requirements, w...
ORGANISM(S): synthetic construct 
2016-06-10 | E-GEOD-79667 | biostudies-arrayexpress
Sort   by:  
 Page size