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MetabolomicsDual transcriptomic & metabolomic analysis of elicited flax sheds light on the kinetics of immune defense activation against the biotrophic pathogen Oidium lini.
Flax (Linum usitatissimum) grown under controlled conditions displayed genotype-dependent resistance to powdery mildew (Oidium lini) following COS-OGA (comprising chitosan- and pectin-derived oligomers) elicitor application. The present study reveals a two-step immune response in plant...
2025-04-25 | MTBLS8263 | MetaboLights
Transcriptomicsgene expression analysis in different tissues of Flax (Linum usitatissimum L.)
We developped a new oligo microarray platform to analyse flax transcriptome. Here, we validated this microarray on several tissues of flax, at different developmental stages. 30 chips study using total RNA from 9 different tissue samples of Flax (Leaf sample at green capsule stage, stem inner tissue...
ORGANISM(S): Linum usitatissimum 
2010-06-15 | E-GEOD-21868 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of flax stems and leaves from 4 week old flax plants to identify transcripts enriched in stem and phloem bast fibres
Stems and leaves from 4 week old flax plants were hybridized to an array of cDNAs from the outer (i.e. phloem enriched) layer of stems of the same age to identify transcripts enriched in stem (and phloem bast fibres).
ORGANISM(S): Linum usitatissimum 
2007-05-01 | E-MEXP-989 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of flax (Linum usitatissimum) developmental series
Three 2cm segments were excised from different parts (TOP, MID, BOT) along the vertical axis of a 4 week old (25cm) stem of flax (L. usitatissimum) were compared using a cDNA amplicon array. Each segment represented a different developmental stage, especially in relation to bast fibre differentia...
ORGANISM(S): Linum usitatissimum 
2007-05-01 | E-MEXP-990 | biostudies-arrayexpress
ProteomicsFlax cell wall proteome - A cell wall proteome and targeted cell wall analyses provide novel information on hemicellulose metabolism in flax
Proteomic analyses of four different flax organs/tissues (inner-stem, outer-stem, leaves and roots) enriched in proteins from 3 different sub-compartments (soluble-, membrane-, and cell wall-proteins) was combined with publically available data on flax seed and whole-stem proteins to generate a flax...
ORGANISM(S): linum usitatissimum 
2017-07-19 | PXD005003 | Pride
Lc-msms Cell wall Flax 
Genomicsflax
flax genome resequencing Raw sequence reads
PRJNA478805 | ENA
GenomicsFlax rust effector transient expression in flax leaves RNA seq
Flax rust effector transient expression in flax leaves RNA seq
PRJNA857488 | ENA
TranscriptomicsTranscriptomics and metabolomics profiling in Flax stem tissues containing contrasted secondary cell wall architectures.
We used our previously described gene expression platform (Fenart et al., 2010) to assess gene expression along the stem of flax, both in inner and outer tissues. 32 chips study using total RNA from Internal and external part of Flax stem, sampled on whole stem or in different parts of the stem.
ORGANISM(S): Linum usitatissimum 
2011-09-30 | E-GEOD-29345 | biostudies-arrayexpress
GenomicsRNAseq of WT + pctrl, ∆flaX + pctrl and ∆flaX + pPflaAX in V. cholerae
RNAseq of WT + pctrl, ∆flaX + pctrl and ∆flaX + pPflaAX in V. cholerae
PRJNA1153032 | ENA
TranscriptomicsFlax rust effector transient expression in flax leaves RNA seq
To investigate theinfluence of Flax rust effectors on gene expression when transiently overexpressed in flax leaves.
ORGANISM(S): Linum usitatissimum 
2022-07-13 | GSE207874 | GEO
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