Food functionality

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Unknown (1423)
Transcriptomics (128)
Genomics (74)
Proteomics (23)
Metabolomics (7)

Organisms

Mus musculus (68)
Andropogon gerardi (21)
Bacteria (21)
Bartonella quintana JK 31 (21)
Canis lupus familiaris (21)
Cnidaria (21)
Ensifer adhaerens (21)
Halictus scabiosae (21)
Human alphaherpesvirus 1 strain 17 (21)
Human alphaherpesvirus 1 strain KOS (21)
Rattus norvegicus (19)
Drosophila melanogaster (11)
Homo sapiens (7)
Caenorhabditis elegans (4)
Bos taurus (2)
Canis lupus familiaris (2)
Sus scrofa (2)
Danio rerio (2)
Streptomyces natalensis ATCC 27448 (1)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (1)
Lactobacillus johnsonii (1)
Bacillus cereus ATCC 14579 (1)
Locusta migratoria (1)
Salmonella enterica subsp. enterica serovar Enteritidis (1)
Spodoptera frugiperda (1)
Saccharina latissima (1)
Oryza sativa (1)
Staphylococcus aureus (1)
Plasmodium falciparum (1)
Escherichia coli O157:H7 (1)

Organisms

Mus musculus (8)
Rattus norvegicus (5)
unidentified (3)
Homo sapiens (2)
Pectobacterium parmentieri CFIA1002 (1)
uncultured soil bacterium (1)
Mixta calida (1)
Pantoea agglomerans IG1 (1)
Meleagris gallopavo (1)
Euphausia superba (1)
terrestrial metagenome (1)
Verrucomicrobium sp. BvORR106 (1)
Verrucomicrobium sp. BvORR034 (1)
Haloferula sp. BvORR071 (1)
Thunnus orientalis (1)
Lacticaseibacillus paracasei (1)
Escherichia coli O157:H7 (1)
Enterococcus faecium (1)
Bacillus velezensis (1)
Ligilactobacillus animalis (1)
Pediococcus pentosaceus (1)
Canis lupus familiaris (1)
mouse gut metagenome (1)
Bos taurus (1)
human gut metagenome (1)

Repository

biostudies-arrayexpress (124)
ENA (73)
pride (21)
MetaboLights (7)
geo (5)
MassIVE (2)

Tissue

Cell culture (3)
Plant cell (2)
Whole body (2)
Blood plasma (1)
Colon (1)
Culture fluid (1)
Fibroblast (1)
Germinated grain (1)
Mycelium (1)
Semen (1)

Disease

Disease free (2)
Wounds and Injuries (2)
Parasitic helminthiasis infectious disease (1)

Technology Type

Mass Spectrometry (21)
Shotgun proteomics (9)
Bottom-up proteomics (7)
Mass spectrometry (6)
Data-dependent acquisition (2)
Data-independent acquisition (2)
Gel-based experiment (2)
Mass spectrometry assay (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (4)
Illumina HiSeq 2500 (2)
Q Exactive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - negative - hilic (2)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2014 (29)
2013 (18)
2012 (12)
2015 (10)
2011 (10)
2010 (10)
2024 (10)
2016 (9)
2008 (7)
2025 (7)
2022 (6)
2019 (5)
2009 (5)
2026 (5)
2020 (3)
2007 (3)
2006 (3)
2023 (3)
2017 (2)
2021 (2)

CHEBI ID

CHEBI:16708 (4)
CHEBI:16634 (4)
CHEBI:72998 (4)
CHEBI:18183 (4)
CHEBI:64304 (3)
CHEBI:69081 (3)
CHEBI:75168 (3)
CHEBI:75555 (3)
CHEBI:87327 (3)
CHEBI:174090 (3)
CHEBI:75454 (3)
CHEBI:34787 (3)
CHEBI:46961 (3)
CHEBI:76233 (3)
CHEBI:41308 (3)
CHEBI:28733 (3)
CHEBI:84268 (3)
CHEBI:9300 (3)
CHEBI:28610 (3)
CHEBI:5712 (3)
CHEBI:16870 (3)
CHEBI:28044 (3)
CHEBI:68433 (3)
CHEBI:16566 (3)
CHEBI:30763 (3)
CHEBI:28794 (3)
CHEBI:27266 (3)
CHEBI:18347 (3)
CHEBI:18211 (3)
CHEBI:48131 (3)

Metabolite Name

D-Raffinose (3)
Glycocholic acid (3)
Arachidonic acid (3)
Citric acid (3)
L-Pyroglutamic acid (3)
(-)-Rhododendrin (2)
(2E)-2-Tridecene-4,6,8-triyn-1-ol (2)
(2E,4E,12Z)-N-Isobutyl-2,4,12-octadecatrienamide (2)
(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-(2-phenylethoxy)oxane-3,4,5-triol (2)
(2R,3S,4S,5S,6R)-2-({7-hydroxy-4-[(3Z)-5-hydroxy-3-methylpent-3-en-1-yl]-4a,8,8-trimethyl-3-methylidene-decahydronaphthalen-2-yl}oxy)-6-(hydroxymethyl)oxane-3,4,5-triol (2)
(2S)-2-Amino-8-hydroxyoctanoic acid (2)
(4E)-1,7-Bis(4-hydroxyphenyl)-4-hepten-3-one (2)
(9Z)-9-Octadecenamide (2)
(E)-Dacarbazine (2)
(E)-p-coumaric acid (2)
(Z)-3-butylidene-7-hydroxyphthalide (2)
[(4Z)-5-(Methylsulfanyl)-4-penten-2-yn-1-yl]benzene (2)
1,2-Cyclohexadione (2)
1,3,7-Octanetriol (2)
1,4-Anhydro-6-O-dodecanoyl-2,3-bis-O-(2-hydroxyethyl)-D-glucitol (2)
2-linoleoylglycerol (2)
1-Monopalmitoylglycerol (2)
1-Hexyl-2-methylbenzene (2)
1-Linoleoyl-sn-glycero-3-phosphocholine (2)
1-oleoyl-sn-glycero-3-phosphoethanolamine (2)
1-Tetradecylamine (2)
2-((2E)-3,7-Dimethyl-2,6-octadienyl)-5,6-dimethoxy-3-methyl-1,4-benzenediol (2)
2-(12-Tridecyn-1-yl)furan (2)
2,2,6,6-Tetramethyl-1-piperidinol (2)
2,3,4,9-Tetrahydro-1H-beta-carboline-1,3-dicarboxylic acid (2)

First Public Date

2023 (12)
2025 (11)
2014 (11)
2024 (7)
2021 (6)
2026 (5)
2022 (4)
2020 (4)
2017 (4)
2016 (4)
2019 (2)
2015 (2)
2013 (1)

Classification

bacteria (5)

Study type

Transcription profiling by array (108)
RNA-seq of coding RNA (5)
RNA-seq of non coding RNA (3)
Animal - One-color microarray (1)
Animal - Single-cell sequencing (1)
High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
MicroRNA profiling by array (1)
Methylation profiling by array (1)

Release Date

2025 (240)
2023 (189)
2022 (177)
2021 (172)
2024 (161)
2020 (113)
2018 (75)
2019 (72)
2017 (48)
2016 (45)
2014 (44)
2026 (41)
2015 (38)
2013 (27)
2012 (25)
2011 (22)
2010 (14)
2009 (12)
2008 (9)
2007 (7)
2006 (5)
2001 (3)
1999 (3)
2004 (2)
2003 (1)
2002 (1)
1998 (1)

Lab affiliation

Associate Professor, Institute of Advanced Study in Science and Technology (IASST), Guwahati-110035, Assam, India (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University of Munich (TUM) Gregor-Mendel-Stasse 4 85354 Freising (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University of Munich (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Center for Microbial Ecology and Technology (CMET), Faculty of Bioscience Engineering Ghent University, Coupure Links 653, 9000 Ghent, Belgium, Center for Advanced Process Technology for Urban Resource recovery (CAPTURE), Frieda Saeysstraat 1, 9052 Ghent, Belgium (1)
Daglig leder, PROMEC Institutt for klinisk og molekylær medisin 73598508 72573342 Laboratoriesenteret, 231.04.008, Øya, Erling Skjalgssons gate 1 (1)
Daglig leder, PROMEC Institutt for klinisk og molekylær medisin lars.hagen@ntnu.no 73598508 72573342 Laboratoriesenteret, 231.04.008, Øya, Erling Skjalgssons gate 1 (1)
Daglig leder, PROMEC Institutt for klinisk og molekylær medisin lars.hagen@ntnu.no 73598508 72573342 Laboratoriesenteret, 231.04.008, Øya, Erling Skjalgssons gate 1 Norway (1)
Dairy Science & Technology, Food Quality & Design group, Wageningen University & Research, Wageningen, The Netherlands (1)
Department Molekulare Systembiologie Helmholtz-Zentrum für Umweltforschung GmbH - UFZ Permoserstraße 15 04318 Leipzig (1)
Department of Chemistry & Bioscience Aalborg University Denmark (1)
Department of Chemistry and Bioscience Aalborg University Denmark (1)
Department of Gamete and Embryo Biology, Institute of Animal Reproduction and Food Research, Polish Academy of Sciences, Poland (1)
Department of chemistry and Bioscience, Aalborg University (1)
Dr. Christina Ludwig Bavarian Center for Biomolecular Mass Spectrometry Technical University Munich (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Food Science Research Institue (CIAL, CSIC-UAM) (1)
Helmholtz Centre for Environmental Research, UFZ (1)
IBERS, Aberystwyth University (1)
Institute of Food Chemistry and Food Biotechnology (1)
Markus Ralser, Prof. Dr. Einstein Professor of Biochemistry Head, Institute of Biochemistry, Charité University Medicine, Berlin markus.ralser@charite.de Senior Group Leader, The Francis Crick Institute, London markus.ralser@crick.ac.uk UK 0044 743 5315249 DE 0049 30 450528141 (1)
Novo Nordisk Foundation Center for Biosustainability, DTU Biosustain, Kgs. Lyngby, Denmark (1)
Univ Rennes, CNRS, Inserm, Biosit UAR 3480 US_S 018, Protim Core Facility, F-35000 Rennes, France (1)

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Core microbes are ecological generalists supporting the host and ecosystem functionality and stability

Core gut microbes persist across diverse gut ecosystems, raising the central question in microbiome research of what defines core microbes and the factors driving their persistence across hosts? Using the rumen microbiome as a model system, our study reveals that core microbes exhibit distinct attri...

2025-05-23 | MTBLS11446 | MetaboLights

Solid-state fermentation of brewer's spent grain using Rhizopus oryzae to produce a protein-rich extract with improved food functionality

The major side stream, brewer's spent grain (BSG), from beer production is valorized by solid-state fermentation using the edible filamentous fungi Rhizopus oryzae. A protein-rich product is made from this an its functionality a potential sustainable food ingredient is compared to an extract prepare...

ORGANISM(S): Hordeum vulgare (Barley) Rhizopus arrhizus

2026-09-25 | PXD055506 | Pride