Fournier J J - OmicsDI

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Unknown (843)
Proteomics (59)
Transcriptomics (10)
Metabolomics (2)

Organisms

Homo sapiens (27)
Rattus norvegicus (12)
Arabidopsis thaliana (5)
Bos taurus (4)
Frankia alni ACN14a (4)
Canis lupus familiaris (3)
Mus musculus (3)
299391 (2)
Alnus glutinosa (2)
Escherichia coli (2)
Frankia alni (2)
Mycobacterium tuberculosis (1)
Saccharomyces cerevisiae (1)
Bdellovibrio bacteriovorus HD100 (1)
Bicyclus anynana (1)
Canis lupus (1)
Drosophila melanogaster (1)
Influenza A virus (A/WSN/1933(H1N1)) (1)
Methylomonas denitrificans (1)
Nitratidesulfovibrio vulgaris str. Hildenborough (1)

Repository

pride (56)
biostudies-arrayexpress (10)
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Disease

Cervix carcinoma (2)
Axonal neuropathy (1)
Brain cancer (1)
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Breast cancer (1)
Human cytomegalovirus infection (1)
Influenza (1)
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Proteasome-associated autoinflammatory syndrome 1 (1)
Proteasome-associated autoinflammatory syndrome 3 (1)
Sarcoma (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (56)
Shotgun proteomics (32)
Bottom-up proteomics (6)
Affinity purification coupled with mass spectrometry proteomics (5)
Chemical cross-linking coupled with mass spectrometry proteomics (5)
Data-dependent acquisition (4)
Top-down proteomics (4)
Gel-based experiment (3)
Mass spectrometry imaging (3)
Mass spectrometry (2)
Data-independent acquisition (1)
SWATH MS (1)

Instrument Platform

Orbitrap Fusion ETD (2)
MA900, Sony (1)
10x Chromium Controller (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
Direct infusion MS - (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2022 (10)
2023 (9)
2025 (8)
2019 (7)
2026 (6)
2016 (6)
2021 (5)
2024 (4)
2018 (3)
2017 (3)
2015 (2)
2014 (2)
2020 (2)
2013 (1)
2010 (1)
2008 (1)
2007 (1)

CHEBI ID

CHEBI:131608 (1)
CHEBI:132032 (1)
CHEBI:132034 (1)
CHEBI:132037 (1)
CHEBI:132489 (1)
CHEBI:132503 (1)
CHEBI:132731 (1)
CHEBI:133719 (1)
CHEBI:134012 (1)
CHEBI:134236 (1)
CHEBI:134237 (1)
CHEBI:134265 (1)
CHEBI:134487 (1)
CHEBI:135533 (1)
CHEBI:135821 (1)
CHEBI:137155 (1)
CHEBI:137164 (1)
CHEBI:137228 (1)
CHEBI:137570 (1)
CHEBI:137653 (1)
CHEBI:137655 (1)
CHEBI:138860 (1)
CHEBI:140471 (1)
CHEBI:140901 (1)
CHEBI:140902 (1)
CHEBI:140947 (1)
CHEBI:140986 (1)
CHEBI:140987 (1)
CHEBI:141291 (1)
CHEBI:142218 (1)

Metabolite Name

(25R)-3beta,4beta-dihydroxycholest-5-en-26-oate(1-) (1)
(S)-Succinyldihydrolipoamide (1)
(Z)-22-Hentriacontene-2,4-dione (1)
1,2-Epoxy-1,2,7,7',8,8',11,12-octahydro-psi,psi-carotene (1)
1,20-Eicosanediol (1)
2-Amino-3-carboxymuconic acid semialdehyde (1)
24,25,26,27-Tetranor-23-oxo-hydroxyvitamin D3 (1)
3'-Deaminofusarochromanone (1)
3-(3-hydroxyphenyl)-2-phenyl-4-[(E)-2-phenylethenyl]-2,3-dihydro-1-benzofuran-6-ol (1)
5-Hydroxy-6-methoxyindole glucuronide (1)
6-[(3-carboxy-3-hydroxy-2-{[3-(4-hydroxy-3-methoxyphenyl)prop-2-enoyl]oxy}propanoyl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
6-phosphogluconic acid (1)
9-cis-beta-Carotene (1)
Albanin F (1)
Artemoin C (1)
Bis(4-isothiocyanatobutyl) disulfide (1)
Brassinolide (1)
Bufotenine O-glucoside (1)
Cholest-5-ene (1)
D-Ribose 5-phosphate (1)
D-glucosamine 6-phosphate (1)
D-ribulose-15-bisphosphate (1)
DG(16:0) (1)
DG(35:3) (1)
DG(36:3) (1)
DG(36:4) (1)
DG(40:6) (1)
DHAP(8:0) (1)
Epoxymurin A (1)
Epoxysiderol (1)

Modification

1x(15)N labeled L-valine (1)

Study type

Transcription profiling by array (5)
Methylation profiling by array (2)
ChIP-chip by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of coding RNA (1)

Release Date

2022 (112)
2025 (81)
2021 (81)
2023 (79)
2024 (67)
2019 (60)
2020 (60)
2018 (48)
2017 (45)
2016 (44)
2015 (41)
2014 (23)
2013 (19)
2026 (17)
2012 (14)
2011 (14)
2010 (12)
2009 (12)
2006 (6)
2007 (5)
2008 (3)
2003 (3)
2005 (2)
2002 (2)
2004 (1)
2001 (1)
1998 (1)

Lab affiliation

Sir William Dunn School of Pathology, University of Oxford (4)
CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France (2)
CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France (2)
Department of Biochemistry, University of Oxford (2)
Laboratoire Protéomique, Réponse Inflammatoire et Spectrométrie de Masse (PRISM) - INSERM U1192 - Université Lille 1, Bât SN3, 1er étage, Cité Scientifique, F-59655 Villeneuve d’Ascq Cedex (2)
Université de Lille, Sciences et Technologies - INSERM U1192 - Laboratoire PRISM (2)
CEA-Marcoule, DRF-Li2D, 30200 Bagnols-sur-Cèze, France (1)
Cellular Signaling and Nuclear Dynamics Program, Institut de Génétique et de Biologie Moléculaire et Cellulaire, UMR 7104, INSERM U964, 1 rue Laurent Fries, 67404 Illkirch, France. (1)
Charles Perkins Centre, School of Medical Sciences, University of Sydney, Sydney, Australia. (1)
Deaprtment of Biochemistry, University of Oxford (1)
Department of Biochemistry, University of Oxford, Oxford, OX1 3QU, UK (1)
Department of Biochemistry, University of Oxford, United Kingdom (1)
Department of Physiology, Anatomy & Genetics, University of Oxford United Kingdom (1)
Division of Cardiovascular Medicine, Radcliffe Department of Medicine, University of Oxford, Oxford, OX3 9DU, UK. (1)
Functional Urology Research Lab, DBMR, University of Bern, 3008 Bern, Switzerland (1)
Institut de Pharmacologie et de Biologie Structurale, IPBS, Université de Toulouse, CNRS, UPS, Toulouse, France. (1)
Institute for Molecular Biosciences University of Queensland Brisbane Qld 4072 Australia (1)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (1)
Laboratoire PRISM INSERM U1192 Universite de Lille France (1)
Laboratoire PRISM INSERM U1192 Université de Lille Villeneuve d'ascq France (1)
Laboratoire Protéomique, Réponse Inflammatoire et Spectrométrie de Masse (PRISM) INSERM U1192- Université Lille 1 Bât SN3, 1er étage, porte 107 F-59655 Villeneuve d’Ascq Cedex France (1)
Laboratoire Protéomique, Réponse Inflammatoire et Spectrométrie de Masse (PRISM) Inserm U1192, Université de Lille Sciences et Technologies, Villeneuve d'Ascq, France. (1)
Laboratoire Protéomique, Réponse Inflammatoire et Spectrométrie de Masse (PRISM)-INSERM U1192, Université de Lille 1, France (1)
Laboratoire Réponse Inflammatoire et Spectrométrie de Masse (PRISM), Inserm U1192 - Université de Lille, Faculté des Sciences, Campus Cité Scientifique, Bât SN3, 1er étage, F-59655 Villeneuve d’Ascq Cedex. Phone: +33 (0)3 20 43 41 94; Fax: +33 (0)3 20 43 40 54 (1)
Laboratory PRISM INSERM U1192 University of Lille, France (1)
Laboratory PRISM-Inserm U1192 university of lille France (1)
Michel Salzet, Univ. Lille, Inserm, U-1192 - Laboratoire Protéomique, Réponse Inflammatoire et Spectrométrie de Masse-PRISM, F-59000 Lille, France (1)
Nottingham University (1)
PRISM - Unite INSERM U1192 Universite de Lille France (1)
PRISM - Unité INSERM 1192 Université de Lille France (1)

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Comparison of different scoring systems for predicting in-hospital mortality for patients with Fournier gangrene.

Not available

S-EPMC10581919 | biostudies-literature

A single amino acid substitution in the envelope protein of chimeric yellow fever-dengue 1 vaccine virus reduces neurovirulence for suckling mice and viremia/viscerotropism for monkeys.

Not available

S-EPMC514991 | biostudies-literature

An omics-based metabolic model of methane-driven denitrification by aerobic methanotrophic bacteria

Methylomonas denitrificans is the first characterized organism that couples methane oxidation to nitrate reduction in pure culture without a partner. The aim of this study is to develop a metabolic model of methane driven nitrate respiration using a multi-level omics approach. Samples of M. denitrif...

ORGANISM(S): Methylomonas denitrificans

2025-09-17 | PXD004041 | Pride

PALB2 acetylation by KAT2A/B (GCN5/PCAF) in vitro

PArtner and Localizer of BRCA2 (PALB2) is essential to maintain genome stability in human cells. Upon DNA damage by double DNA strand breaks, PALB2 is required to repair DNA by homologous recombination. In undamaged conditions, PALB2 protects coding regions, by preventing DNA stress due to collision...

ORGANISM(S): Homo sapiens (Human)

2023-03-10 | PXD014681 | Pride

Acetylation Dna repair

A 1-week diet break improves muscle endurance during an intermittent dieting regime in adult athletes: A pre-specified secondary analysis of the ICECAP trial.

Not available

S-EPMC7906362 | biostudies-literature

Phytochemical and Safety Evaluations of Finger Lime, Mountain Pepper, and Tamarind in Zebrafish Embryos.

Not available

S-EPMC9311898 | biostudies-literature

Longitudinal scRNAseq profiling of memory B cells in mRNA vaccinated individuals post BA.1-breakthrough infection

Memory B cells play a fundamental role in host defenses against viruses. This dataset aimed at understanding the recruitment and remodeling of the memory B cell repertoire in the context of BA.1-breakthrough infection in BNT162b2 mRNA vaccinated individuals. All four donors enrolled in the study had...

ORGANISM(S): Homo sapiens

2023-08-15 | E-MTAB-12651 | biostudies-arrayexpress

Identifying Protective Drugs for Parkinson's Disease in Health-Care Databases Using Machine Learning.

Not available

S-EPMC10087353 | biostudies-literature

Early identification and diagnosis of fournier gangrene: a machine learning approach integrating serological characterization.

Not available

S-EPMC12482003 | biostudies-literature

The co-chaperone DNAJC12 binds to Hsc70 and is upregulated by endoplasmic reticulum stress.

Not available

S-EPMC3982032 | biostudies-literature

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