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Iron (Fe) is a trace nutrient required by nearly all organisms. As a result of the demand for Fe and the toxicity of non-chelated cytosolic ionic Fe, regulatory systems have evolved to tightly balance Fe acquisition and usage while limiting overload. In most bacteria, including the mammalian pathoge...
ORGANISM(S): Staphylococcus aureus 
2025-05-06 | PXD051930 | Pride
Genes involved in disease resistance are some of the fastest evolving and most diverse components of genomes. Large numbers of nucleotide-binding, leucine-rich repeat receptor genes (NLRs) are found in plant genomes and provide disease resistance. However, NLRs can trigger autoimmunity, disrupt bene...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2020-12-16 | PXD022684 | Pride
Genome-wide occupancy of BDR1, BDR2 and FPA (ChIP-seq)
Illumina RNA-Seq of FPA mutants and Overexpressors
We generated Arabidopsis lines expressing tagged (3X Myc tag) versions of BDR1 or BDR2 driven by their endogenous promoters on a bdrs triple mutant background (bdrs: cross of bdr1/AT5G25520 mutant SALK_142108C, bdr2/AT5G11430 mutant CS852350 and bdr3/AT2G25640 mutant SALK_059905). The genome-wide di...
ORGANISM(S): Arabidopsis thaliana 
2019-08-08 | GSE113059 | GEO
Nanopore direct RNA sequencing of FPA mutants and overexpressors
Gene expression profiling in wild-type, fpa mutant and bdrs triple mutant Arabidopsis seedlings
We analyzed by RNA-seq the transcriptome of 8-day old Arabidopsis thaliana seedlings for wild-type (Col-0), single mutant for FPA (fpa/AT2G43410, line fpa-7) or a triple mutant of all three BDR proteins (bdrs: cross of bdr1/AT5G25520 mutant SALK_142108C, bdr2/AT5G11430 mutant CS852350 and bdr3/AT2G2...
ORGANISM(S): Arabidopsis thaliana 
2019-08-08 | GSE112440 | GEO
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