Frank L L - OmicsDI

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UNIPROT ID/AC

P26309 (3)
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ENSEMBL ID

ENSG00000113580 (1)
ENSG00000144852 (1)
ENSG00000160868 (1)
ENSG00000198650 (1)
ENST00000336411 (1)
ENST00000337940 (1)
ENST00000343796 (1)
ENST00000355962 (1)
ENSG00000170477 (1)

CHEBI ID

CHEBI:16027 (7)
CHEBI:16015 (6)
CHEBI:15428 (6)
CHEBI:16610 (6)
CHEBI:25017 (6)
CHEBI:16695 (5)
CHEBI:15891 (5)
CHEBI:17148 (5)
CHEBI:17822 (5)
CHEBI:24898 (5)
CHEBI:28044 (5)
CHEBI:28300 (5)
CHEBI:28865 (5)
CHEBI:15611 (4)
CHEBI:15729 (4)
CHEBI:15422 (1)
CHEBI:15713 (1)
CHEBI:16474 (1)
CHEBI:16541 (1)
CHEBI:16761 (1)
CHEBI:16962 (1)
CHEBI:17650 (1)
CHEBI:18009 (1)
CHEBI:18361 (1)
CHEBI:28938 (1)
CHEBI:30011 (1)
CHEBI:33699 (1)
CHEBI:33704 (1)
CHEBI:41879 (1)
CHEBI:43474 (1)

Metabolite Name

Glycine (4)
Spermidine (4)
CA (3)
CDCA (3)
DCA (3)
GCA (3)
GCDCA (3)
GDCA (3)
GLCA (3)
Gamma-aminobutyric acid (3)
L-glutamic acid (3)
L-ornithine (3)
L-tyrosine (3)
LCA (3)
Putrescine (3)
TCA (3)
TCDCA (3)
TDCA (3)
TLCA (3)
TUDCA (3)
Taurine (3)
Taurine (3)
UDCA (3)
Alanine (2)
Glutamine (2)
Glycine (2)
Hypotaurine (2)
L-alanine (2)
L-asparagine (2)
L-aspartic acid (2)

IsPrivate

False (8)

First Public Date

2018 (1)

Modelling Approach

Ordinary differential equation model (8)

Modification

6x(2)H labeled dimethylated L-arginine (1)

Study type

Transcription profiling by array (535)
RNA-seq of coding RNA (84)
ChIP-seq (42)
RNA-seq of non coding RNA (25)
Methylation profiling by array (20)
Comparative genomic hybridization by array (13)
Unknown experiment type (11)
RNA-seq of coding RNA from single cells (10)
ChIP-chip by tiling array (8)
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Other (6)
Animal - Single-cell sequencing (5)
Human - One-color microarray (4)
Cell line - High-throughput sequencing (3)
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Genotyping by array (3)
Animal - High-throughput sequencing (2)
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DNA-seq (2)
RNA-seq of total RNA (2)
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Human - Single-cell sequencing (1)
Human - High-throughput sequencing (1)
RNAi profiling by array (1)
MicroRNA profiling by high throughput sequencing (1)
RIP-seq (1)
ScATAC-seq (1)
Proteomic profiling by array (1)

Release Date

2022 (219)
2021 (213)
2025 (183)
2024 (178)
2023 (168)
2015 (153)
2014 (151)
2012 (150)
2020 (145)
2018 (139)
2016 (128)
2013 (124)
2019 (123)
2010 (122)
2011 (121)
2017 (84)
2009 (55)
2008 (51)
2007 (42)
2026 (32)
2006 (22)
2005 (18)
2003 (6)
2004 (2)
2002 (2)
2000 (1)

Lab affiliation

Department of Pharmaceutical Biotechnology, Institute of Pharmacy, University of Greifswald, Germany (3)
EMBL Grenoble (3)
Medical University of Vienna, Austria (3)
European Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 Heidelberg, Germany. (2)
Rutgers University-Newark, Chemistry Department (2)
University Medicine Greifswald Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics ZIK-FunGene Junior Research Group Applied Proteomics Friedrich-Ludwig-Jahn-Str. 15a D-17487 Greifswald Germany Phone: +49-3834-865887 Fax: +49-3834-86795887 (2)
1)Department of Pediatrics III, University Hospital Essen, Hufelandstrasse 55, 45147 Essen, Germany. 2)Department of General, Visceral, Vascular and Transplant Surgery, Medical Faculty, University Hospital Essen, Hufelandstrasse 55, 45147 Essen, Germany. (1)
AG Proteomics & Bioanalytics Institut für Experimentelle Medizin Christian-Albrechts-Universität zu Kiel 24105 Kiel, Germany (1)
Associate professor, Department of Biochemistry and Molecular Biology, University of Southern Denmark (1)
Biomedical Research Institute, Foundation for Research and Technology-Hellas, Ioannina, Greece. (1)
Biozentrum of the University of Basel (1)
Biozentrum, University of Basel, Klinglebergstrasse 50/70, CH-4056 Basel (1)
Centre for Structural Systems Biology, 22607 Hamburg, Germany; Bernhard Nocht Institute for Tropical Medicine, 20359 Hamburg, Germany; University of Hamburg, 20146 Hamburg, Germany (1)
Department for Biochemistry and Molecular Biology University of Southern Denmark Odense, Denmark (1)
Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark (1)
Department of Biological Sciences and the Center for Emerging, Zoonotic, and Arthropod-Borne Pathogens, Virginia Tech, Blacksburg, VA (1)
Department of Biological Sciences, University of Cyprus, Cyprus (1)
Department of Cell- and Developmental Biology, Center for Anatomy and Cell Biology, Medical University of Vienna, Vienna, Austria (1)
Department of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences P. O. Box 5003 N-1432 Ås Norway (1)
Department of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås Norway (1)
Department of Fundamental Microbiology, University of Lausanne, 1015 Lausanne, Switzerland. (1)
Department of Fundamental Neurosciences, University of Lausanne, Switzerland (1)
Department of Immunology and Microbiology Institute of Biomedicine Sahlgrenska Academy University of Gothenburg (1)
Department of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94403, USA Quantitative Biosciences Institute, University of California, San Francisco, San Francisco, CA 94403, USA Innovative Genomics Institute, Berkeley, CA, USA (1)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research (CNCR), Amsterdam Neuroscience, VU University Amsterdam, The Netherlands (1)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, VU University Amsterdam, The Netherlands (1)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, The Netherlands (1)
Department of Neurology, Yale School of Medicine, Yale University, new haven CT, USA (1)
Department of Neuropathology, Charité – Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, Berlin Institute of Health, Berlin, Germany (1)
Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium VIB-Center for Plant Systems Biology, Gent, Belgium (1)

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The first two complete mitochondrial genomes of <i>Butyriboletus roseoflavus</i> (Hai B. Li & Hai L. Wei) D. Arora & J.L. Frank 2014 (Boletales: Boletaceae) and phylogenetic analysis.

Not available

S-EPMC12207772 | biostudies-literature

Candida albicans DOPA-grown cells

The fungal pathogen Candida albicans produces dark-pigmented melanin when grown in a basal medium containing 1 mM l-DOPA as melanin substrate. In the widely used C. albicans strain SC5314, melanin appeared after 3-4 days of incubation in l-DOPA medium. The experiment was designed to reveal cadidat...

ORGANISM(S): Candida albicans

2010-07-07 | E-GEOD-20338 | biostudies-arrayexpress

Rem-GTPase regulates cardiac myocyte L-type calcium current.

Not available

S-EPMC3431588 | biostudies-literature

Leishmania major modulates autophagy in host macrophages during intracellular differentiation

Autophagy generally participates in innate immunity by elimination of intracellular pathogens. However, many of them developed successful strategies to counteract their autolysosomal digestion and lastly to exploit this catabolic cellular process. Protozoan parasites of the genus Leishmania are the ...

ORGANISM(S): Mus musculus

2015-08-03 | E-GEOD-52624 | biostudies-arrayexpress

Flow in the presence or absence of L-NAME or ODQ versus no flow

HUVEC were exposed to 150 minutes of high shear stress using a Cellmax flow cardtridge either in the presence or absence of 100 uM L-NAME or 10 uM L-ODQ; luminal flow was 25 ml/min; resulting a shear stress of 25 dyn/cm2. A simultaneously run cartridge not subjected to luminal, but to pericapillary ...

ORGANISM(S): Homo sapiens

2007-04-25 | E-UMCU-10 | biostudies-arrayexpress

Mycorrhizal Metabolome: L. bicolor :: P. trichocapra

Mycorrhizae, symbiotic interactions between soil fungi and tree roots, are ubiquitous in terrestrial ecosystems. The fungi contribute phosphorous, nitrogen and mobilized nutrients from organic matter in the soil and in return the fungus receives photosynthetically-derived carbohydrates. This union...

ORGANISM(S): Populus tremuloides

2011-03-25 | E-GEOD-28157 | biostudies-arrayexpress

Transcriptional responses to injury in kidney cortex of nitric oxide depleted rats are ameliorated by vitamin E

Male Sprague-Dawley rats were given NOS inhibitor L-NNA (500 mg/l water) for 4 days, 21 days or 21 days with Vitamin E in chow (0.7 g/kg BW/day) (4d-LNNA, 21d-LNNA and 21d-LNNA+VitE, respectively).

ORGANISM(S): Rattus norvegicus

2007-03-01 | E-UMCU-18 | biostudies-arrayexpress

Metabolic Profiling of Volatile Organic Compounds (VOCs) Emitted by the Pathogens Francisella tularensis and Bacillus anthracis in Liquid Culture

We conducted comprehensive (untargeted) metabolic profiling of volatile organic compounds (VOCs) emitted in culture by bacterial taxa Francisella tularensis (F. tularensis) subspecies novicida and Bacillus anthracis (B. anthracis) Sterne, surrogates for potential bacterial bioterrorism agents, as we...

2020-08-20 | MTBLS1737 | MetaboLights

Expression data from Pseudomonas putida KT2440

In this study we exploited next-generation Illumina sequencing technology (Wang et al., 2009) to refine the current annotation of the KT2440 genome. Transcriptome sequencing data were queried for yet undescribed small RNAs and ORFs and employed to validate predicted operons and gene coordinates. Exp...

ORGANISM(S): Pseudomonas putida KT2440

2011-03-25 | E-GEOD-24176 | biostudies-arrayexpress

Leishmania major infection-induced changes in the small RNA transcriptome of host macrophages.

Protozoan parasites of the genus Leishmania are the causative agent of leishmaniasis, one of the 13 most important tropical diseases. Leishmania persists as endo-parasite in host macrophages, where it uses multiple strategies to manipulate the microbicidal host cell functions and to escape from the ...