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UnknownMetabolomic biomarkers predict long-term physical function in survivors of acute respiratory failure.
Not available
S-EPMC12781719 | biostudies-literature
TranscriptomicsTranscription profiling of C. elegans gene response to the pathogenic P. aeruginosa strain PA14.
Analysis of differential gene expression in C. elegans adults exposed to three different bacteria: E. coli strain OP50, wild-type P. aeruginosa PA14 and gacA mutant PA14. Samples were analyzed at 4 hours and 8 hours after exposure to the different bacteria. These studies identified C. elegans genes ...
ORGANISM(S): Caenorhabditis elegans 
2008-06-14 | E-GEOD-5793 | biostudies-arrayexpress
TranscriptomicsEffect of rosiglitazone on adipose gene expression in HSL knockout mice with different diet treatment
To test whether HSL is required for the supply of intrinsic ligands for PPARg for normal adipose differentiation, HSL-/- and wild type (WT) littermates were fed normal chow (NC) and high fat (HF) diets supplemented with or without rosiglitazone (200 mg/kg) for 16 weeks. The expression of diabetes re...
ORGANISM(S): Mus musculus 
2012-03-18 | E-GEOD-20588 | biostudies-arrayexpress
UnknownThe conformational space of RNase P RNA in solution.
Not available
S-EPMC11779636 | biostudies-literature
TranscriptomicsGene expression profiling of chemokines and chemokine receptors on B-cells in chronically HIV-1 infected patients
From the analysis of all genes included in the array a number of individual genes were identified as dys-regulated in HIV-1 infected patients compared to healthy controls. In particular, increased CXCL13 expression in all individual patient samples. Abstract from publication: HIV-1 infection is ass...
ORGANISM(S): Homo sapiens 
2010-06-25 | E-GEOD-12597 | biostudies-arrayexpress
UnknownStructure and mechanism of activity of the cyclic phosphodiesterase of Appr>p, a product of the tRNA splicing reaction.
Not available
S-EPMC305825 | biostudies-literature
ProteomicsThe anti-MRSA compound KCR inhibits protein synthesis in Staphylococcus aureus
S aureus was treated in triplicate with 3-O-alpha-L-(2",3"-di-p-coumaroyl)rhamnoside (KCR), oxacillin or vehicle and quantitative proteomic analysis was carried out using isobaric tags and mass spectrometry. 1190 proteins were identified and 552 were affected by KCR (q<0.01). Ontology analysis ide...
ORGANISM(S): Staphylococcus Aureus (ncbitaxon:1280) 
MSV000084282 | MassIVE
TranscriptomicsLacerated muscle gene expression
We investigated the inflammatory gene profile of surgically-repaired lacerated muscles during the recovery phase and examined if it was influenced by the integrity/injury of the IM, intramuscular nerve using 3 lacerated rat muscle models: DN, where the IM-nerve was concomitantly cut; RN, where the I...
ORGANISM(S): Rattus Norvegicus 
2012-01-11 | E-MTAB-755 | biostudies-arrayexpress
UnknownIdentification of a Cryptic Bacterial Promoter in Mouse (mdr1a) P-Glycoprotein cDNA.
Not available
S-EPMC4550409 | biostudies-literature
no omics definedGenotyping of twenty Pseudomonas aeruginosa strains
20 P. aeruginosa strains were genotyped using a custom spotted oligo array (Ausubel P. aruginosa genotyping 4.8K v1), which included primarily oligos for genes present in strain PA14 but absent in PAO1, and oligos for genes present in PAO1 but absent in PA14 (as well as controls).
ORGANISM(S): Pseudomonas aeruginosa 
2006-10-06 | E-MEXP-824 | biostudies-arrayexpress
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