Gautam R R - OmicsDI

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Unknown (667)
Transcriptomics (16)
Metabolomics (16)
Proteomics (7)
Genomics (3)

Organisms

Mus musculus (9)
Homo sapiens (5)
Alphavirus (4)
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Eukaryota (4)
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Miscanthus x giganteus (4)
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Panicum virgatum (4)
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Aspergillus fumigatus (2)
Arabidopsis thaliana (2)
Rattus norvegicus (1)

Organisms

soil metagenome (1)

Repository

biostudies-arrayexpress (18)
MetaboLights (15)
pride (4)
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Normal (2)
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Brain glioblastoma multiforme (1)
Glioblastoma (1)

Technology Type

Mass spectrometry (10)
NMR spectroscopy (4)
Mass Spectrometry (4)
Shotgun proteomics (4)
Mass spectrometry assay (1)

Instrument Platform

Illumina NovaSeq 6000 (2)
LTQ Orbitrap Velos (2)
Q Exactive (2)
Nuclear Magnetic Resonance (NMR) (2)
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Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive - reverse phase (2)
3' v3.1 10X (1)
Chromium X (1)
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Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
LTQ Orbitrap XL (Thermo Scientific) (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2013 (5)
2021 (5)
2015 (4)
2025 (3)
2014 (3)
2018 (3)
2023 (3)
2017 (3)
2022 (2)
2010 (2)
2020 (2)
2012 (1)
2011 (1)
2024 (1)
2016 (1)
2019 (1)

CHEBI ID

CHEBI:18186 (6)
CHEBI:27897 (6)
CHEBI:18237 (5)
CHEBI:28300 (5)
CHEBI:24898 (5)
CHEBI:28044 (5)
CHEBI:17750 (5)
CHEBI:16919 (5)
CHEBI:17822 (4)
CHEBI:25094 (4)
CHEBI:22660 (4)
CHEBI:22653 (4)
CHEBI:27570 (4)
CHEBI:30751 (4)
CHEBI:16811 (4)
CHEBI:15741 (4)
CHEBI:73024 (4)
CHEBI:16704 (4)
CHEBI:15366 (4)
CHEBI:18012 (4)
CHEBI:15354 (4)
CHEBI:15676 (3)
CHEBI:16708 (3)
CHEBI:25017 (3)
CHEBI:15428 (3)
CHEBI:17568 (3)
CHEBI:27266 (3)
CHEBI:7916 (3)
CHEBI:16449 (3)
CHEBI:29016 (3)

Metabolite Name

Tryptophan (4)
Tyrosine (3)
Phenylalanine (3)
Isoleucine (3)
Glutamine (3)
Oxoglutarate (2)
Formate (2)
Acetate (2)
Histidine (2)
Glutamate (2)
Leucine (2)
Aspartate (2)
Glycine (2)
Serine (2)
Proline (2)
Fumarate (2)
Formate (2)
Phenylalanine (2)
Succinate (2)
Acetate (2)
Valine (2)
Uracil (2)
Valine (2)
Acetylcarnitine (2)
Choline (2)
Lysine (2)
Lactate (2)
Asparagine (2)
Serine (2)
Alanine (2)

First Public Date

2016 (1)

Study type

Transcription profiling by array (15)
Single nucleus RNA sequencing (1)
ChIP-seq (1)
DNA-seq (1)

Release Date

2022 (99)
2023 (94)
2024 (82)
2021 (79)
2025 (67)
2020 (53)
2019 (43)
2018 (38)
2014 (23)
2016 (19)
2026 (18)
2015 (16)
2013 (14)
2017 (12)
2011 (8)
2012 (7)
2010 (6)
2009 (2)
2008 (2)
2003 (2)
2007 (1)

Lab affiliation

Institute of Bioinformatics, Bangalore - 560066, India (1)
Institute of Infection and Global Health, University of Liverpool, Liverpool, UK (1)
Proteomics lab, Indian Institute of Technology (IIT) Bombay (1)
Research Service (R&D22) VA Portland Health Care System 3710 SW US Veterans Hospital Rd. Portland, OR 97239 USA (1)

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Insights from molecular modeling and dynamics simulation of pathogen resistance (R) protein from brinjal.

Not available

S-EPMC3046036 | biostudies-literature

soil metagenome

Long term fertilizer experiment NRRI Cuttack

PRJNA320453 | ENA

Effect of amphotericin B on Aspergillus fumigatus

Amphotericin B (AMB) is the most widely used polyene antifungal drug for the treatment of systemic fungal infections including invasive aspergillosis. We aimed to understand molecular targets of AMB in Aspergillus fumigatus (Afu) by genomic approaches. Amphotericin B (AMB) is the most widely used p...

ORGANISM(S): Aspergillus fumigatus

2010-05-26 | E-GEOD-10505 | biostudies-arrayexpress

Effect of Artemisinin on Aspergillus fumigatus gene expression program

We examined the antifungal activity of artemisinin against Aspergillus fumigatus (A. fumigatus), a pathogenic filamentous fungus responsible for allergic and invasive aspergillosis in humans and analyzed transcript profiles of the fungus on exposure to Artemisinin. A. fumigatus spores were cultured ...

ORGANISM(S): Aspergillus fumigatus

2011-05-11 | E-GEOD-21297 | biostudies-arrayexpress

In silico analysis to identify novel ceRNA regulatory axes associated with gallbladder cancer.

Not available

S-EPMC9978489 | biostudies-literature

DTNBP1, a schizophrenia susceptibility gene, affects kinetics of transmitter release.

Not available

S-EPMC2396815 | biostudies-literature

Antioxidant and Antimutagenic Activities of Different Fractions from the Leaves of Rhododendron arboreum Sm. and Their GC-MS Profiling.

Not available

S-EPMC6225473 | biostudies-literature

Understanding the role of cleaning in the control of Salmonella Typhimurium in grower-finisher pigs: a modelling approach.