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TranscriptomicsChromatin immunopreciptiation to determine the genome wide locatio of different components of the RNA polymerase II preinitiation complex in yeast
Genome wide location of different components of RNA polymerase II preinitiation complex in yeast S.cerevisiae
ORGANISM(S): Saccharomyces cerevisiae 
2008-06-01 | E-MEXP-1502 | biostudies-arrayexpress
TranscriptomicsChromatin immunoprecipitation to reveal the location of transcription factor TFIIS binding in yeast
Genome-wide location of transcription factor TFIIS
ORGANISM(S): Saccharomyces cerevisiae 
2008-06-01 | E-MTAB-10 | biostudies-arrayexpress
TranscriptomicsTargeted PCR amplification and sequencing of reporter constructs from stage 6 drosophila embryos
Targeted PCR amplification and sequencing of a reporter construct from a nos-phiC31; attP40 line of Drosophila stage 6 embryos. Flies carried two copies of one of 25 different enhancer reporter assays. The region amplified by PCR contains the enhancer and 10X cell barcodes required for analysis. Thr...
ORGANISM(S): Drosophila melanogaster 
2025-07-14 | E-MTAB-14445 | biostudies-arrayexpress
TranscriptomicsSingle-Cell RNA sequencing of stage 6 Drosophila embryos with 25 enhancer reporter assays
Single-cell RNA sequencing (scRNA-seq) in Drosophila embryos at 2.5 to 3.5 hours after egg lay (corresponding to developmental stages 5 to 7, with a majority of stage 6). The experiments were performed in the nos-phiC31; attP40 fly line containing a reporter construct with the sequence of a candidat...
ORGANISM(S): Drosophila melanogaster 
2025-07-14 | E-MTAB-14447 | biostudies-arrayexpress
GenomicsGenomic binding of Pol III transcription machinery and relationship with TFIIS distribution in mouse embryonic stem cells
RNA polymerase (RNA Pol) III synthesizes the tRNAs, the 5S ribosomal RNA and a small number of untranslated RNAs. In vitro, it also transcribes short interspersed nuclear elements (SINEs). We investigated the distribution of RNA Pol III and its associated transcription factors on the genome of mouse...
ORGANISM(S): Mus musculus 
2011-09-16 | E-MTAB-767 | biostudies-arrayexpress
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