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ProteomicsIdentification and spectral annotation of the threespine stickleback gill proteome
Gill proteome samples from four populations of threespined sticklebacks; Six biological replicates each for 4 different populations: Bodega Harbor, CA (fully plated, marine), Lake Solano (low-plated, freshwater), Laguna de la Bocana del Rosario, Mexico (low plated, brackish water, warm-adapted), Wes...
ORGANISM(S): Gasterosteus Aculeatus (ncbitaxon:69293) 
2017-12-09 | MSV000081795 | MassIVE
ProteomicsMolecular characterisation of the Atlantic salmon gill epithelial cell line ASG-10
Fish gills are not only the respiratory organ, but also essential for ion-regulation, acid-base control, detoxification, waste excretion and host defense. Multifactorial gill diseases are common in farmed Atlantic salmon, and still poorly understood. Understanding gill pathophysiology is of paramoun...
ORGANISM(S): Salmo salar (Atlantic salmon) 
2024-01-26 | PXD044533 | Pride
Transcriptome Gill cell line Salmon cell line Proteome 
ProteomicsEffect of water emersion on the gill proteome of Mangrove killifish
Gill proteome of Mangrove killifish was compared by LC-MS/MS using 6 biological replicates of fish exposed to emersion stress versus 6 biological replicates kept under water that served as controls. PI: Experiments and fish exposures were performed in the laboratory of Prof. Patricia Wright at the U...
ORGANISM(S): Kryptolebias Marmoratus (ncbitaxon:37003) 
2017-03-15 | MSV000080634 | MassIVE
ProteomicsNonlinear effects of environmental salinity on the gill transcriptome versus proteome of Oreochromis niloticus
Here we report the generation of a data-independent acquisition (DIA) assay library that enables simultaneous targeted proteomics of 1900 O. niloticus gill proteins using a label- and gel-free workflow that is well suited for ecologically relevant field samples. By determining alignment and mismatch...
ORGANISM(S): Oreochromis Niloticus 
2021-10-23 | PXD024648 | panorama
ProteomicsInvestigation of the host response of naïve Atlantic salmon gill to repeat inoculation with Paramoeba perurans
In aquaculture, recurrence rates of Amoebic Gill Disease (AGD), caused by the ectoparasite Paramoeba perurans (P. perurans) are high and no prophylactic strategies exist for disease prevention. In this study, Atlantic salmon (Salmo salar) were initially inoculated with P. perurans and following the ...
ORGANISM(S): Salmo salar (Atlantic salmon) 
2021-05-21 | PXD024096 | Pride
Salmon Gill Proteomics 
ProteomicsGill metaproteomic of deep-sea mussel Gigantidas haimaensis
This projiect aims to identify the proteome of the symbiotic gill, including the host and symbiotic bacteria proteins, and to reveal the metabolic interdependence among the tripartite holobiont which is based on mussel, methane-oxidizing endosymbiont and sulfur-oxidizing episymbiont.
ORGANISM(S): Gigantidas haimaensis 
2022-10-12 | PXD030676 | Pride
Cold seep Bathymodioline Chemosynthesis Symbiosis Metaproteome Mytilidae 
ProteomicsInvestigation of the host response of naïve Atlantic salmon (Salmo salar) inoculated with Paramoeba perurans prior to the onset of clinical symptoms
Amoebic Gill Disease (AGD), caused by the ectoparasite Paramoeba perurans (P. perurans) is characterised by hyperplasia of the gill epithelium and lamellar fusion and has become recognised as one of the most significant health threats in salmon farming . In this study, the gill and serum proteomes o...
ORGANISM(S): Salmo salar (Atlantic salmon) 
2021-04-16 | PXD022101 | Pride
Serum proteome Atlantic salmon Gel-free proteomics Amoebic gill disease Gill proteome 
ProteomicsHost-symbiont proteomes of Bathymodiolus thermophilus
Bathymodiolus mussels inhabiting deep-sea hydrothermal vents harbor bacterial symbionts in their gills, which support the animals’ diet. While the basic mechanisms of energy generation and CO2 fixation that drive these symbioses are largely established, details of molecular interactions between the ...
ORGANISM(S): Bathymodiolus azoricus (Mussel) Bathymodiolus thermophilus 
2019-11-08 | PXD011639 | Pride
Bathymodiolus Symbiosis Hydrothermal vent Symbiont Host Proteome 
ProteomicsCrab Scylla paramamosain gill LC-MSMS
The project aims to reveal the proteomic responses of crab Scylla paramamosain to high and low salinity stress.
ORGANISM(S): Scylla paramamosain 
2021-09-09 | PXD022815 | Pride
Crab scylla paramamosain gill lc-msms 
Proteomicsproteome of ERK kinase inhibited oyster gill
we systematically analyzed the downstream regulatory network of ERK kinase in oysters via ERK inhibited and heat stress treatment, followed by proteome.
ORGANISM(S): Crassostrea gigas (Pacific oyster) (Crassostrea angulata) 
2026-03-12 | PXD065668 | Pride
Erk1/2 Thermal adaptation Oysters 
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