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TranscriptomicsENCODE Cold Spring Harbor Labs Long RNA-seq (hg19)
This data was generated by ENCODE. If you have questions about the data, contact the submitting laboratory directly (Carrie Davis mailto:davisc@cshl.edu (experimental), Alex Dobin mailto:dobin@cshl.edu (computational), Felix Schlesinger mailto:schlesin@cshl.edu (computational), Tom Gingeras mailto:g...
ORGANISM(S): Homo sapiens 
2011-07-13 | E-GEOD-30567 | biostudies-arrayexpress
TranscriptomicsPromoter activity profiling throughout the Drosophila life cycle reveals role of transposons in regulatory innovation
Since their discovery, transposable elements have been proposed to play a central role in the evolution of their host genomes through their ability to regulate gene expression, in particular by providing transcription start sites (TSSs) for host genes. To investigate their contribution to developmen...
ORGANISM(S): Drosophila melanogaster 
2012-08-30 | E-GEOD-36212 | biostudies-arrayexpress
TranscriptomicsSmall RNA-seq from ENCODE/Cold Spring Harbor Lab
This data was generated by ENCODE. If you have questions about the data, contact the submitting laboratory directly (Jonathan Preall jpreall@cshl.edu (Generation 0 Data from Hannon Lab), Carrie Davis davisc@cshl.edu (experimental), Alex Dobin dobin@cshl.edu (computational), Wei Lin wlin@cshl.edu (co...
ORGANISM(S): Homo sapiens 
2010-10-08 | E-GEOD-24565 | biostudies-arrayexpress
TranscriptomicsGenome-wide non-polyadenylated transcription in differentiating mouse embryonic stem cells reveals novel non-coding RNA related to pluripotency and differentiation
The transcriptional landscape in embryonic stem cells (ESCs) and during ESC differentiation has received considerable attention in recent years, but reports have so far been confined to the polyadenylated fraction of RNA, while the non-polyadenylated (NPA) fraction remained largely unexplored. Notwi...
ORGANISM(S): Mus musculus 
2013-04-17 | E-GEOD-37338 | biostudies-arrayexpress
TranscriptomicsComparison between cell lines from 9 different cancer tissue (NCI-60) (Affymetrix HuEx 1.0)
Comparison between cell lines from 9 different cancer tissue of origin types (Breast, Central Nervous System, Colon, Leukemia, Melanoma, Non-Small Cell Lung, Ovarian, Prostate, Renal) from NCI-60 panel Cell lines from 9 different cancer tissue of origin types
ORGANISM(S): Homo sapiens 
2011-06-16 | E-GEOD-29682 | biostudies-arrayexpress
TranscriptomicsRNA-Seq of human individual tissues and mixture of 16 tissues (Illumina Body Map)
Transcription profiling by high throughput sequencing of individual and mixture of 16 human tissues RNA. This dataset is part of the TransQST collection.
ORGANISM(S): Homo sapiens 
2011-05-05 | E-MTAB-513 | biostudies-arrayexpress
UnknownExpanded encyclopaedias of DNA elements in the human and mouse genomes.
Not available
S-EPMC7410828 | biostudies-literature
UnknownDiscovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network.
Not available
S-EPMC8172540 | biostudies-literature
UnknownPerspectives on ENCODE.
Not available
S-EPMC7410827 | biostudies-literature
UnknownIdentification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.
Not available
S-EPMC2212820 | biostudies-literature
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