Glioblastoma stem cells

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UNIPROT ID/AC

P01579 (1)
P01137 (1)

CHEBI ID

CHEBI:21557 (3)
CHEBI:17385 (3)
CHEBI:16704 (3)
CHEBI:15891 (3)
CHEBI:16668 (3)
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CHEBI:16628 (2)
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CHEBI:16530 (2)
CHEBI:30838 (2)
CHEBI:48928 (2)
CHEBI:28044 (2)

Metabolite Name

Inosine (3)
3-hydroxykynurenine (2)
N-formylmethionine (2)
2'-deoxycytidine (2)
1-methylhistidine (2)
O-Tyrosine (2)
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Zotepine (1)
Tyr-Thr-Arg (1)
Thr-His-Lys (1)
Tetrahydro-l-biopterin (1)
Terracinolide j (1)
Sulfadoxin (1)
Solstitialin a (1)
Sialyl lewis a (1)
Secbumeton (1)
Ronidazole (1)
(r)-lisofylline (1)

First Public Date

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2020 (44)
2019 (44)
2017 (42)
2015 (34)
2018 (32)
2016 (12)
2013 (7)
2012 (1)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

Institute of Biochemistry II, Faculty of Medicine, Goethe University, Frankfurt am Main, Germany Frankfurt Cancer Institute, Frankfurt am Main, Germany Cardio-Pulmonary Institute, Frankfurt am Main, Germany (2)
Keck MS & Proteomics Resource Yale School of Medicine (2)
Team SOAP, CRCI2NA, Nantes Université, Inserm, CNRS, Université d’Angers, Nantes, France (2)
1. Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, USA 2. UPMC Hillman Cancer Center, Pittsburgh, PA, USA 3. Department of Neurology, University of Pittsburgh, Pittsburgh, PA, USA 4. Department of Neurology, University of North Carolina, Chapel Hill, NC, USA (1)
1. Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, USA 2. UPMC Hillman Cancer Center, Pittsburgh, PA, USA 3. Department of Neurology, University of Pittsburgh, Pittsburgh, PA, USA 4. Department of Neurology, University of North Carolina, Chapel Hill, NC, USA (lab head) (1)
Analytical Chemistry Lab Fondazione Istituto Italiano di Tecnologia Via Morego 30, 16163 Genova Italy (1)
Barts Cancer Institute, Queen Mary University of London (1)
Brain Tumor Translational Targets B067 German Cancer Research Center (DKFZ) Im Neuenheimer Feld 580 69120 Heidelberg Germany Phone: +49 6221 42-4635 (1)
Brain tumor translational targets German Cancer Research Center (DKFZ) Im Neuenheimer Feld 580 69120 Heidelberg Germany (1)
CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France (1)
CIC bioGUNE Proteomics Platform Bizkaia Tech. Park Build 800 Derio 48160 Spain (1)
CNRS, Inserm, Nantes Université, Univ Angers, CRIC2NA, Nantes, France (1)
Center for Theragnosis, Korea Institute of Science and Technology, Seoul, Korea (1)
Cleveland Clinic Lerner Research Institute (1)
Cleveland Clinic Lerner Research Institute Cardiovascular and Metabolic Sciences (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Biotechnology, College of Life Science and Biotechnology, Korea University, Seoul, Republic of Korea (1)
Department of Chemistry and Chemical Biology, Barnett Institute of Chemical & Biological Analysis, Northeastern University, Boston, MA, United States (1)
Department of Experimental Oncology, European Institute of Oncology (IEO), IRCCS, Milan 20139, Italy (1)
Department of Genetics, Washington University School of Medicine, St. Louis, MO, USA; The Edison Family Center for Genome Sciences and Systems Biology, Washington University School of Medicine, St. Louis, MO, USA; McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA (1)
Department of Genome Sciences, University of Washington, Seattle, USA (1)
Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India (1)
Department of Molecular Cell Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Montebello, N-0379 Oslo, Norway (1)
Department of Molecular Medicine, Cornell University, Ithaca, NY 14853 Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853 (1)
Department of Neurological Surgery, Washington University in St. Louis School of Medicine (1)
Department of Neurology, University of Pittsburgh Medical Center, Pittsburgh, PA, USA (1)
Department of Neurosurgery, Chongqing Research Center for Glioma Precision Medicine, Chongqing General Hospital, Chongqing University (1)
Department of Neurosurgery, Experimental Neurosurgery, University Hospital, Goethe University, Frankfurt am Main, Germany German Cancer Consortium (DKTK), Partner Site Frankfurt, Frankfurt am Main, Germany German Cancer Research Center DKFZ, Heidelberg, Germany (1)
Department of Oncology and Pathology, Science for Life Laboratory, Karolinska Institute (1)
Department of Oncology and Pathology, Science for Life Laboratory, Karolinska Institute, Stockholm, Sweden (1)

IsPrivate

False (1)

Submitter Keywords

Immuno-oncology (1)

Modification

4x(2)H labeled dimethylated residue (1)

Study type

Transcription profiling by array (334)
RNA-seq of coding RNA (59)
Comparative genomic hybridization by array (28)
ChIP-seq (24)
Methylation profiling by array (15)
ChIP-chip by tiling array (10)
Genotyping by array (9)
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Human - High-throughput sequencing (3)
Cell line - One-color microarray (3)
Transcription profiling by RT-PCR (3)
Methylation profiling by high throughput sequencing (3)
RNA-seq of total RNA (3)
Cell line - Single-cell sequencing (2)
Unknown experiment type (2)
RNAi profiling by array (2)
RIP-seq (2)
Other (2)
DNA-seq (2)
RNA-seq of non coding RNA (2)
ChIP-chip by SNP array (1)
Cell line - Methylation microarray (1)
MicroRNA profiling by high-throughput sequencing (1)
One-color microarray (1)
Human - Single-cell sequencing (1)
Translation profiling (1)
Transcription profiling by tiling array (1)
ChIP-chip by array (1)
Spatial transcriptomics by high-throughput sequencing (1)

Release Date

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2015 (175)
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2014 (130)
2013 (124)
2011 (85)
2010 (85)
2012 (83)
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2008 (36)
2009 (34)
2006 (9)
2007 (6)
2005 (2)
2004 (2)

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Aberrant L-Fucose accumulation and increased core fucosylation are metabolic liabilities in mesenchymal glioblastoma (Stem cell and cell line assays)

Glioblastoma (GBM) is a common and deadly form of brain tumor in adults. Dysregulated metabolism in GBM offers an opportunity to deploy metabolic interventions as precise therapeutic strategies. To identify the molecular drivers and the modalities by which different molecular subgroups of GBM exp...

2022-11-08 | MTBLS4708 | MetaboLights

Aberrant L-Fucose accumulation and increased core fucosylation are metabolic liabilities in mesenchymal glioblastoma (Xenograft assays)

2022-11-08 | MTBLS730 | MetaboLights

Mitochondrial Transplantation of Brown Adipocytes Interferes with the Metabolism of Tumor Stem Cells and Inhibits the Recurrence of Brain Glioma after Operation

Glioblastoma multiforme (GBM) is highly aggressive, with treatment resistance and recurrence driven by metabolically plastic glioma stem cells (GSCs). Inspired by brown adipose tissue (BAT) thermogenesis, researchers transplanted BAT-derived mitochondria (BA-Mito) into GSCs, reducing stemness mar...

2025-08-27 | MTBLS12901 | MetaboLights

Glioblastoma microvesicles transport RNA and proteins

Glioblastoma tumour cells release microvesicles (exosomes) containing mRNA, miRNA and angiogenic proteins. These microvesicles are taken up by normal host cells, such as brain microvascular endothelial cells. By incorporating an mRNA for a reporter protein into these microvesicles, we demonstrate th...

ORGANISM(S): Homo sapiens

2008-11-15 | E-GEOD-13470 | biostudies-arrayexpress

DNA methylation profiling of glioblastoma cancer stem cells

Glioblastoma (GBM) is thought to be driven by a sub-population of cancer stem cells (CSCs) that self-renew and recapitulate tumor heterogeneity, yet remain poorly understood. Here we present a comparative epigenomic analysis of GBM CSCs that reveals widespread activation of genes normally held in ch...

ORGANISM(S): Homo sapiens

2013-05-28 | E-GEOD-46015 | biostudies-arrayexpress

Transcription profling of glioblastoma stem-like (GS) cell lines, conventional glioma cell lines and primary tumors

We compared a large panel of human glioblastoma stem-like (GS) cell lines, corresponding primary tumors and conventional glioma cell lines to identify cell lines that preserve the transcriptome of human glioblastomas most closely, thereby allowing identification of shared therapeutic targets. We us...

ORGANISM(S): Homo sapiens

2011-02-12 | E-GEOD-23806 | biostudies-arrayexpress

Methylation profiling of glioblastoma neural stem cells and reprogrammed derivatives

Glioblastoma-derived neural stem (GNS) cells were reprogrammed to induced pluripotent stem (iPS) cells by transgenic expression of OCT4 and KLF4. Genome-wide DNA methylation status was profiled at 27,578 CpG sites to assess epigenetic erasure and restoration due to reprogramming and redifferentiatio...

ORGANISM(S): Homo sapiens

2013-03-15 | E-MTAB-1275 | biostudies-arrayexpress

Transcription profiling of human glioma cell lines reveals CD133(+) and CD133(-) glioblastoma-derived cancer stem cells show differential growth characteristics and expression profiles

We cultured tumor cells from 22 GBM under medium conditions favoring the growth of neural stem cells. 11 out of 15 primary GBM contained a significant CD133+ subpopulation that comprised cells showing all hallmarks of neural stem cells. Cell lines derived from these CD133+ GBM showed a neurosphere-l...

ORGANISM(S): Homo sapiens

2007-11-01 | E-GEOD-7181 | biostudies-arrayexpress

High-resolution methylation profiling of glioblastoma neural stem cells and reprogrammed derivatives

Glioblastoma-derived neural stem (GNS) cells were reprogrammed to induced pluripotent stem (iPS) cells by transgenic expression of OCT4 and KLF4. Genome-wide DNA methylation status was profiled at 485,000 loci to assess epigenetic erasure and restoration due to reprogramming and redifferentiation to...

ORGANISM(S): Homo sapiens

2013-03-15 | E-MTAB-1274 | biostudies-arrayexpress

Comparative genomic hybridization by array of glioblastoma-derived neural stem cells

Comparative genomic hybridization of glioma neural stem cells and normal human reference DNA

ORGANISM(S): Homo sapiens

2012-09-21 | E-MTAB-972 | biostudies-arrayexpress

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