Gopalakrishnan V V

Show results for

Unknown (255)
Transcriptomics (14)
Proteomics (7)
Metabolomics (6)
Genomics (5)

Organisms

Homo sapiens (14)
Mus musculus (7)
Rattus norvegicus (3)
Aenocyon dirus (1)
Elizabethkingia meningoseptica (1)

Repository

biostudies-arrayexpress (15)
pride (7)
MetaboLights (6)
EGA (4)

Tissue

Monocyte (2)
Blood serum (1)
Bone marrow (1)
Brain (1)
Mammary epithelium (1)
Stem cell (1)

Technology Type

Mass Spectrometry (7)
Shotgun proteomics (6)
Mass spectrometry (5)
Illumina HiSeq 2500, ILLUMINA (1)
Mass spectrometry assay (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
Element AVITI (2)
Illumina NovaSeq 6000 (1)
Liquid Chromatography MS - positive (1)

Publication Date

2023 (5)
2025 (3)
2013 (3)
2015 (2)
2012 (2)
2010 (2)
2009 (2)
2022 (2)
2021 (2)
2020 (2)
2014 (1)
2024 (1)
2026 (1)

CHEBI ID

CHEBI:16359 (3)
CHEBI:28865 (3)
CHEBI:35038 (3)
CHEBI:139138 (2)
CHEBI:143745 (2)
CHEBI:143757 (2)
CHEBI:173703 (2)
CHEBI:182784 (2)
CHEBI:195271 (2)
CHEBI:27432 (2)
CHEBI:27997 (2)
CHEBI:34494 (2)
CHEBI:34687 (2)
CHEBI:64563 (2)
CHEBI:73858 (2)
CHEBI:75342 (2)
CHEBI:80774 (2)
CHEBI:10136 (1)
CHEBI:116314 (1)
CHEBI:131342 (1)
CHEBI:145227 (1)
CHEBI:16113 (1)
CHEBI:16196 (1)
CHEBI:16235 (1)
CHEBI:16312 (1)
CHEBI:165384 (1)
CHEBI:16551 (1)
CHEBI:16610 (1)
CHEBI:166468 (1)
CHEBI:166710 (1)

Metabolite Name

Cholic acid (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
9(10)-EpOME (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
Dibutyl phthalate (DBP) (2)
Elaidic acid (2)
Lyso-PC(16:0) (2)
Monoolein (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Taurocholic acid (2)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
1,3,5-triprop-2-enyl-1,3,5-triazaperhydroine-2,4,6-trione (1)
1,4a-dimethyl-9-oxo-7-propan-2-yl-3,4,10,10a-tetrahydro-2H-phenanthrene-1-carboxylic acid (1)
1-(9Z-Octadecenoyl)-sn-glycero-3-phosphocholine (1)
1-Heptadecanoyl-sn-glycero-3-phosphocholine (1)
1-Hexadecanoyl-sn-glycerol (1)
1-Hexadecyl-sn-glycero-3-phosphocholine (1)
1-Myristoyl-2-stearoyl-sn-glycero-3-phosphocholine (1)
1-Myristoyl-sn-glycero-3-phosphocholine (1)
1-Palmitoyl-2-myristoyl-sn-glycero-3-phosphocholine (1)
13(S)-HODE methyl ester (1)
13-Keto-9Z,11E-octadecadienoic acid (1)
16-Hydroxyhexadecanoic acid (1)
17(18)-EpETE (1)
2-((4R)-4-((3R,5R,6S,9S,10R,13R,14S,17R)-3,6-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)

Study type

Transcription profiling by array (7)
Methylation profiling by array (2)
RNA-seq of coding RNA (2)
ChIP-chip by tiling array (1)
Bisulfite-seq (1)
Comparative genomic hybridization by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (28)
2021 (28)
2022 (27)
2020 (25)
2024 (24)
2017 (21)
2023 (19)
2019 (17)
2018 (12)
2015 (10)
2013 (10)
2016 (10)
2014 (9)
2026 (6)
2011 (6)
2012 (5)
2009 (5)
2010 (3)
2007 (2)
2005 (1)
2004 (1)
1999 (1)

Lab affiliation

BioArCh, Department of Archaeology, University of York (1)
Center for Systems Biology and Molecular Medicine Yenepoya Research Centre Yenepoya (Deemed to be University) University Road, Deralakatte Mangalore 575018, India Phone: 0824-2204668 (Ext:2057) (1)
Center for Systems Biology and Molecular Medicine, Yenepoya Research Center, Yenepoya (Deemed to be University), Mangalore, India (1)
Institute of Bioinformatics, 7th floor, Discover Building, International Tech Park, Bangalore, India. (1)
Institute of Immunology Rikshospitalet, University hospitla Oslo, Norway (1)
Leibniz Institute on Aging - Fritz Lipmann Institute FLI (1)
Professor and Deputy Director Center for Systems Biology and Molecular Medicine Yenepoya Research Centre Yenepoya (Deemed to be University) University Road, Deralakatte Mangalore 575018, India (1)

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A Unifying Model for Molecular Determinants of the Pre-selection Vb Repertoire [RNA-Seq]

The primary antigen receptor repertoire is sculpted by the process of V(D)J recombination, which must strike a balance between diversification and favoring gene segments with specialized functions. The precise determinants of how often gene segments are chosen to complete variable region coding exon...

ORGANISM(S): Mus musculus

2013-08-14 | E-GEOD-49233 | biostudies-arrayexpress

IL-17-dependent cellular immunity to collagen type V predisposes to obliterative bronchiolitis in human lung transplants.

Not available

S-EPMC2040314 | biostudies-literature

B cell receptor ligation induces display of V-region peptides on MHC class II molecules to T cells.

Not available

S-EPMC6926052 | biostudies-literature

Hepatitis B virus subgenotype A1 predominates in liver disease patients from Kerala, India.

Not available

S-EPMC3882402 | biostudies-literature

DEFINING A RAT BLOOD PRESSURE QUANTITATIVE TRAIT LOCUS TO A <81.8KB CONGENIC SEGMENT: COMPREHENSIVE SEQUENCING AND RENAL TRANSCRIPTOME ANALYSIS.

Evidence from multiple linkage and genome-wide association studies suggest that human chromosome 2 (HSA2) contains alleles that influence blood pressure (BP). Homologous to a large segment of HSA2 is rat chromosome 9 (RNO9), to which a BP quantitative trait locus (QTL) was previously mapped. The obj...

ORGANISM(S): Rattus norvegicus

2010-07-15 | E-GEOD-22515 | biostudies-arrayexpress

A Unifying Model for Molecular Determinants of the Pre-selection VÎ² Repertoire [ChIP-chip]

Chip-chip from pro-T(DN) cells from Rag1KO mice for H3K27ac, P300 and FAIRE The primary antigen receptor repertoire is sculpted by the process of V(D)J recombination, which must strike a balance between diversification and favoring gene segments with specialized functions. The precise determinants o...

ORGANISM(S): Mus musculus

2013-08-14 | E-GEOD-42851 | biostudies-arrayexpress

Genome-wide identification of rat long non-coding RNAs (microarray)

In the current study, we have focused on a distinct group of non-coding elements, lncRNA, and profiled renal tissues from three different inbred rat strains. We chose the three strains S, SHR and R for the main purpose of cataloging lncRNA annotations from the most widely used rat models of cardiov...

ORGANISM(S): Rattus norvegicus

2014-12-10 | E-GEOD-59165 | biostudies-arrayexpress

Co-cultivation of microalgae and bacteria for optimal bioenergy feedstock production in wastewater by using response surface methodology.

Not available

S-EPMC11377697 | biostudies-literature

Electroceutical fabric lowers zeta potential and eradicates coronavirus infectivity upon contact.

Not available

S-EPMC8571396 | biostudies-literature

A comprehensive approach to clustering of expressed human gene sequence: the sequence tag alignment and consensus knowledge base.

Not available

S-EPMC310831 | biostudies-literature