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TranscriptomicsFine mapping of genome activation in bovine embryos by RNA sequencing
During maternal-to-embryonic transition control of embryonic development gradually switches from maternal RNAs and proteins stored in the oocyte to gene products generated after embryonic genome activation (EGA). Detailed insight into the onset of embryonic transcription is obscured by the presence ...
ORGANISM(S): Bos taurus 
2014-02-09 | E-GEOD-52415 | biostudies-arrayexpress
TranscriptomicsDeep Sequencing of the Porcine Endometrial Transcriptome on Day 14 of Pregnancy
In pigs, conceptus attachment to the uterine surface epithelium starts around day 14 of pregnancy preceded by a pronounced vascularization at the implantation zones, initiating the epitheliochorial placentation. To characterize the complex transcriptome changes in the endometrium in the course of in...
ORGANISM(S): Sus scrofa 
2013-03-07 | E-GEOD-43667 | biostudies-arrayexpress
TranscriptomicsRIP-Seq and RNA-Seq of an RNA-binding protein secreted by Listeria monocytogenes which activates RIG-I signaling
Secreted bacterial RNAs have recently emerged as a novel host-pathogen interaction mode. Naked RNA molecules are highly labile in the extracellular environment and must be protected by packaging into membrane vesicles or into complexes with RNA binding proteins. RNA secretion through membrane vesicl...
ORGANISM(S): Listeria monocytogenes EGD-e 
2019-10-16 | E-MTAB-7665 | biostudies-arrayexpress
TranscriptomicsRNAseq of the the Growth Modulon of Corynebacterium glutamicum under Glucose Limited Chemostat Conditions
RNAseq of coding RNA via Illumina TruSeq stranded mRNA sequencing of C. glutamicum ATCC 13032 growing under glucose limited chemostat conditions with growth rate = 0.2, 0.3, and 0.4 h-1 in three biological replicates on Illumina HiSeq1500 platform.
ORGANISM(S): Corynebacterium glutamicum ATCC 13032 
2020-07-27 | E-MTAB-9371 | biostudies-arrayexpress
TranscriptomicsMusashi 2 is a regulator of the hematopoietic stem cell compartment identified by a retroviral insertion screen and knockout mice
We have used a retroviral integration screen to search for novel genes that regulate hematopoietic stem cell (HSC) function. One of the genes that conferred HSC dominance when overexpressed due to an adjacent retroviral insertion was Musashi 2 (Msi2), an RNA binding protein that can act as a transla...
ORGANISM(S): Mus musculus 
2011-05-21 | E-GEOD-29432 | biostudies-arrayexpress
ProteomicsPhosphoproteomic characterization of infulenza A virus infected human macrophages
Human primary macrophages were infected with influenza A virus (H3N2/Udorn strain, HA 256) for 6 hrs or left untreated. Cells were collected and lysed with HEPES lysis buffer (50 mM HEPES, 150 mM NaCl, 1 mM EDTA, 1 % NP-40, pH 7.4) including protease and phosphatase inhibitor cocktails. The cell lys...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-29 | MSV000080717 | MassIVE
UnknownMaternal exercise conveys protection against NAFLD in the offspring via hepatic metabolic programming.
Not available
S-EPMC7508970 | biostudies-literature
TranscriptomicsExpression profiling of TGF-beta-induced and hnRNP E1-mediated epithelial-mesenchymal transition
Regulation of gene expression at the post-transcriptional level plays an indispensable role during TGFbeta-induced EMT and metastasis. This regulation involves a transcript-selective translational regulatory pathway in which a ribonucleoprotein (mRNP) complex, consisting of heterogeneous nuclear rib...
ORGANISM(S): Mus musculus 
2012-08-30 | E-GEOD-40466 | biostudies-arrayexpress
UnknownMultiscale, multimodal analysis of tumor heterogeneity in IDH1 mutant vs wild-type diffuse gliomas.
Not available
S-EPMC6934292 | biostudies-literature
TranscriptomicsTranscription profiling by array of Pichia pastoris transformed with a vector carrying Fab3H6 and grown in different oxygen levels
The effect of oxygen availability on recombinant protein production in Pichia pastoris
ORGANISM(S): Pichia pastoris 
2010-06-09 | E-MEXP-2742 | biostudies-arrayexpress
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