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ProteomicsShotgun proteomics on a granular biofilm microbial community from wastewater
The shotgun proteomics data originate from a granular biofilm microbial community involved in Enhanced Biological Phosphorus Removal. The granules were analyzed using an integrated multi-omics approach, combining metagenomics, metaproteomics, and metabolomics to investigate metabolic underlaying mod...
ORGANISM(S): uncultured Dechloromonas sp. 
2026-08-28 | PXD067586 | Pride
Pao Ags Metaproteomics Enrichment Ebpr 
ProteomicsMetaproteomic analysis of laboratory-scale floccular and granular biofilms enriched with Accumulibacter phosphatis
Biofilms are ubiquitous in nature, forming diverse adherent microbial communities that perform a plethora of functions. Here, we operated two laboratory-scale sequence batch reactors enriched with Candidatus Accumulibacter phosphatis (Accumulibacter) performing enhanced biological phosphorus removal...
ORGANISM(S): Candidatus Accumulibacter phosphatis 
2015-08-24 | PXD002404 | Pride
Flocs Granules Caphplc-ms/ms Wastewater Accumulibacter phosphatis 
Genomicselectroactive biofilm
electroactive biofilm in anaerobic granular sludge functioned as capactive biocatalyst
PRJNA451128 | ENA
ProteomicsMetaproteomic profiling of a granule-forming Ca. Accumulibacter enrichment
Extracellular proteins play key roles in microbial biofilm and aggregate formation, yet remain poorly understood. Using two advanced metaproteomic techniques, this study identified and classified 387 extracellular proteins potentially involved in aggregate formation, including filamentous and cell s...
ORGANISM(S): Candidatus Accumulibacter phosphatis 
2025-02-21 | PXD057220 | Pride
Shotgun proteomics Ca. accumulibacter phosphatis Granular biofilm Secretome 
UnknownResistance of aerobic granular sludge microbiomes to periodic loss of biomass.
Not available
S-EPMC10415711 | biostudies-literature
UnknownTrophic interactions shape the spatial organization of medium-chain carboxylic acid producing granular biofilm communities.
Not available
S-EPMC10579388 | biostudies-literature
UnknownCommunity quorum sensing signalling and quenching: microbial granular biofilm assembly.
Not available
S-EPMC5515215 | biostudies-literature
UnknownPharmaceutical impacts on aerobic granular sludge morphology and potential implications for abiotic removal.
Not available
S-EPMC10843683 | biostudies-literature
TranscriptomicsExpression data from Pseudomonas aeruginosa (wild type and lasRrhlR mutant strains) exposed to human neutrophils
In the present in vitro study, interactions between P. aeruginosa (sessile biofilms as well as planktonic cells) and PMNs were analyzed by means of DNA microarray based transcriptomics. We found that the P. aeruginosa wild type biofilms, in contrast to planktonic cultures and quorum sensing (QS) def...
ORGANISM(S): Pseudomonas aeruginosa 
2009-08-04 | E-GEOD-6769 | biostudies-arrayexpress
Genomics
Granular sludge and biofilm samples at different phases
PRJNA1157042 | ENA
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