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MetabolomicsComprehensive lipid analysis of green Arabica coffee beans by LC-HRMS/MS
Lipids play an important role in coffee bean development, coffee brew and in the effects of coffee on human health. They account for around 17% of the dry bean weight and encompass different classes and subclasses, mostly triacylglycerols (TAG) and a minor quantity of phospholipids (PL) and βN-alkan...
2021-11-19 | MTBLS1972 | MetaboLights
ProteomicsVenomics of the East African green mamba and black mamba, highlights the complexity of their toxin arsenal
Complementary bottom-up MS/MS analyses for the venom phenotype map for the eastern green mamba and black mamba
ORGANISM(S): Dendroaspis angusticeps (Eastern green mamba) (Naja angusticeps) Dendroaspis polylepis polylepis (Black mamba) 
2016-06-27 | PXD003876 | Pride
Green mamba Venom Black mamba Venomics 
MetabolomicsMetabolomic analysis of riboswitch containing E. coli recombinant expression system
In this study we have employed metabolomics approaches to understand the metabolic effects of producing enhanced green fluorescent protein (eGFP) as a recombinant protein in Escherichia coli cells. This metabolic burden analysis was performed against a number of recombinant expression systems and co...
2017-11-16 | MTBLS393 | MetaboLights
TranscriptomicsThe transcriptome of embryos of the green anole, Anolis carolinensis, at 28 and 38 somite pair stages
Anolis carolinensis embryos were collected 0-1 days post egg laying, and total RNA was extracted for RNA-Seq analysis (Illumina Hi-Seq2000). Transcriptome sequence from these stages in the green anole, equivalent to mouse 9.5-10.5 dpc embryos, will help to improve gene annotations in A. carolinensis...
ORGANISM(S): Anolis carolinensis 
2011-12-14 | E-GEOD-34415 | biostudies-arrayexpress
MetabolomicsOverexpression of Brassica napus COMT1 in Arabidopsis heightens UV-B-mediated resistance to Plutella xylostella herbivory

UV-B radiation regulates numerous morphogenic, biochemical and physiological responses in plants, and can stimulate some responses typically associated with other abiotic and biotic stimuli, including invertebrate herbivory. Removal of UV-B from the growing environment of various plant species ha...

2023-08-14 | MTBLS8236 | MetaboLights
TranscriptomicsTranscription profiling of Arabidopsis seed compartments at the mature green stage.
We collected mature green seed compartments from 7 micron paraffin sections using the Leica LMD6000 system in order to identify the mRNAs present in different compartments from seeds containing mature green-stage embryos. For the purposes of this study we captured 6 compartments: embryo proper, micr...
ORGANISM(S): Arabidopsis thaliana 
2009-03-21 | E-GEOD-15165 | biostudies-arrayexpress
MetabolomicsGNPS LC-MSn study of green, white, and black tea extracts
Abstract of the study: Advanced analytical approaches consisting of both LC-LTQ-Orbitrap Fourier transformed (FT)-MS and LC-time-of-flight-(TOF)-MS coupled to solid-phase extraction (SPE) NMR were used to obtain more insight into the complex phenolic composition of tea. On the basis of the combined...
ORGANISM(S): Camellia Sinensis (ncbitaxon:4442) 
2018-01-03 | MSV000081877 | GNPS
TranscriptomicsSolanum lycopersicumTranscriptome or Gene expression
Gene expression in wild-type fruit. Strand-specific RNA-Seq data was used to calculate the gene expression value (RPKM) in four wild-type fruit developmental stages including immature fruit at 17DPA, mature green fruit (seeds development completes) at 39DPA, breaker fruit (onset of ripening) at 42DP...
ORGANISM(S): Solanum lycopersicum 
2011-10-07 | E-MTAB-4818 | biostudies-arrayexpress
ProteomicsActinomycin targets NPM1c-primed mitochondria in AML
Acute myeloid leukemia (AML) pathogenesis often involves a mutation in the NPM1 nucleolar chaperone, but the bases for its transforming properties and association with favorable outcome remain incompletely understood. Here we demonstrate that an oncogenic mutant form of NPM1 (NPM1c) hampers formatio...
ORGANISM(S): Homo sapiens (Human) 
2021-12-17 | PXD025507 | Pride
Pml Lfq Actinomycin d Mitochondria Npm1c Qexactive Senescence 
UnknownHuman Serum Albumin Decorated Indocyanine Green Improves Fluorescence-Guided Resection of Residual Lesions of Breast Cancer in Mice.
Not available
S-EPMC7983674 | biostudies-literature
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