H3k36me3 - OmicsDI

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West China Second University Hospital, Sichuan University (2)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA 3Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
Bioanalytical Mass Spectrometry Group, Max Planck Institute for Multidisciplinary Sciences, Germany. Bioanalytics Group, Institute of Clinical Chemistry, University Medical Center Goettingen, Germany. (1)
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Histone Modifications Group Zentrallabor für Proteinanalytik BioMedical Center Faculty of Medicine Ludwig-Maximilians-University of Munich Großhadernerstr. 9 82152 Planegg-Martinsried (1)
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Novo Nordisk Center for Protein Research (CPR), Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark. Biotech Research and Innovation Centre (BRIC), Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark. (1)
Novo Nordisk Foundation Center for Protein Research (CPR), University of Copenhagen, Copenhagen, Denmark. (1)
Research Director, Professor Protein Signaling Program Novo Nordisk Foundation Center for Protein Research University of Copenhagen (1)
The Province and Ministry Co-sponsored Collaborative Innovation Center for Medical Epigenetics, Key Laboratory of Immune Microenvironment and Disease (Ministry of Education), Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Tianjin Medical University, Tianjin, China (1)
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Université de Poitiers, UMR CNRS 7267 Écologie & Biologie des Interactions, Équipe Sucres & Echanges Végétaux-Environnement, 3 rue Jacques Fort, 86073 Poitiers, France (1)

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Crosstalk between gene body DNA methylation, H3K9me3 and H3K36me3 chromatin marks and transcription [HuGene-1_0-st]

This is one of expressional parts of the study. These data were correlated to epigenetic marks and CG density of genes in analyzed cells. The whole study has a following summary: To elucidate possible roles of DNA methylation and chromatin marks in transcription, we performed epigenetic profiling of...

ORGANISM(S): Homo sapiens

2011-03-31 | E-GEOD-26019 | biostudies-arrayexpress

Polycomb PHF19 binds H3K36me3 and recruits PRC2 and demethylase NO66 to embryonic stem cell genes during differentiation

The Polycomb group proteins are repressive chromatin modifiers with essential roles in metazoan development, cellular differentiation and cell fate maintenance. How Polycomb proteins access active chromatin in order to confer transcriptional silencing during lineage transitions remains unclear. Here...

ORGANISM(S): Mus musculus

2012-11-17 | E-GEOD-41609 | biostudies-arrayexpress

H3K36me3 profiling in mTEClo

PRJNA736029 | ENA

Targeted Profiling of Epitranscriptomic Reader, Writer and Eraser Proteins Regulated by H3K36me3

Trimethylation of lysine 36 on histone H3 (H3K36me3), an epigenetic mark associated with actively transcribed genes, plays an important role in multiple cellular processes, including transcription elongation, DNA methylation, DNA repair, and RNA m6A methylation, etc. Aberrant expression and mutation...

ORGANISM(S): Homo sapiens (Human)

2023-05-25 | PXD041343 | Pride

Comparative methylomics reveals gene-body H3K36me3 in Drosophila predicts DNA methylation and CpG landscapes in other invertebrates

Here, we demonstrate that Nematostella vectensis, Ciona intestinalis, Apis mellifera, and B. mori, show two distinct populations of genes differentiated by gene-body CpG density. Genome-scale DNA methylation profiles for A. mellifera spermatozoa reveal CpG-poor genes are methylated in the germ line,...

ORGANISM(S): Apis mellifera

2011-06-16 | E-GEOD-29982 | biostudies-arrayexpress

H3K36me3.Clone_8

modENCODE_submission_3004 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of the major histone modifications across the Drosophila melanogaster genome. The modificat...

ORGANISM(S): Drosophila melanogaster

2011-03-09 | E-GEOD-27739 | biostudies-arrayexpress

H3K4me1 directs H3K36me2 and H3K36me3 deposition in land plants

Monomethylation of histone H3 lysine 4 (H3K4me1) marks enhancers in mammals. However, the function of H3K4me1 in plants remains largely unclear. Here, we analyzed the genome-wide distribution of H3K4me1 in diverse species across evolution, revealing a distinctive H3K4me1 distribution pattern in land...

ORGANISM(S): Oryza Sativa

PXD068723 |

YLR455 affinity purification - An H3K36me3 binding PWWP protein targets the NuA3 acetyltransferase complex to coordinate transcriptional elongation at coding regions

These studies define a new form of the NuA3 complex that associates with H3K36me3 to effect transcriptional elongation.

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2014-08-14 | PXD001156 | Pride

Epigenetics Pwwp domain Histone methylation Gene regulation Nua3 Transcription elongation Histone acetylation

Genome-wide maps of H3K36me3 in metastatic renal cell carcinoma and isogenic renal cell carcinoma cell lines

We report the application of H3K36me3 ChIP sequencing in SETD2 genotyped samples Examination of H3K36me3 in SETD2 wild-type, mutant renal cell carcinoma and SETD2 isogenic cell lines

ORGANISM(S): Homo sapiens

2015-06-19 | E-GEOD-66884 | biostudies-arrayexpress

H3K36me3, message from chromatin to DNA damage repair.

Not available

S-EPMC6995143 | biostudies-literature

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