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TranscriptomicsMitochondria help avoid glucose addiction in cancer cells
Cancer cells consume large amounts of glucose because of their specific metabolic pathway. However, cancer cells exist in tumor tissue where glucose is insufficient. To survive, cancer cells likely have the mechanism to elude their glucose addiction. Here we show that functional mitochondria are ess...
ORGANISM(S): Homo sapiens 
2010-05-28 | E-GEOD-16157 | biostudies-arrayexpress
ProteomicsIdentification of HLA class I immunopeptide from human colon tissue (Tumor)
HLA Class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos with FAIMS. Personalized database which includes patient-specific somatic mutations obtained from whole exome sequencing (WES) data was used for database search. Identification results were filt...
ORGANISM(S): Homo Sapiens (human) 
2022-08-20 | PXD023805 | JPOST Repository
ProteomicsComparison of efficacy in immunfopeptide identification from HCT116 by "with" FAIMS
HLA class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos with FAIMS. Customized database which includes somatic mutations of HCT116 obtained from COSMIC database was used for database search. Identification results were filtered at 1% FDR threshold by...
ORGANISM(S): Homo Sapiens (human) 
2022-08-20 | PXD023771 | JPOST Repository
ProteomicsIdentification of HLA class I immunopeptide from human colon tissue (Normal)
HLA Class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos with FAIMS. Personalized database which includes patient-specific somatic mutations obtained from whole exome sequencing (WES) data was used for database search. Identification results were filt...
ORGANISM(S): Homo Sapiens (human) 
2022-08-20 | PXD023804 | JPOST Repository
ProteomicsGlobal identification of HCT116 immunopeptides by FAIMS-assisted immunopeptidomics
HLA Class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos with FAIMS. Customized database which includes somatic mutations of HCT116 obtained from COSMIC database was used for database search. Identification results were filtered at 1% FDR thresholds b...
ORGANISM(S): Homo Sapiens (human) 
2022-08-20 | PXD023773 | JPOST Repository
ProteomicsComparison of efficacy in immunopeptide identification from HCT116 by "without" FAIMS
HLA class I immunopeptides were affinity purified by W6/32 antibody and analyzed by Orbitrap Fusion Lumos without FAIMS. Customized database which includes somatic mutations of HCT116 obtained from COSMIC database was used for database search. Identification results were filtered at 1% FDR threshol...
ORGANISM(S): Homo Sapiens (human) 
2022-08-20 | PXD023770 | JPOST Repository
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