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MetabolomicsInorganic Carbon Limitation in Cells of the Wild Type and Photorespiratory Mutants of the Cyanobacterium Synechocystis sp. Strain PCC 6803
The amount of inorganic carbon represents one of the main environmental factors determining productivity of photoautotrophic organisms. Using the model cyanobacterium Synechocystis sp. PCC 6803, we performed a first metabolome study with cyanobacterial cells shifted from high CO2 (5% in air) into co...
2015-09-14 | MTBLS5 | MetaboLights
UnknownIGF2BP1 induces neuroblastoma via a druggable feedforward loop with MYCN promoting 17q oncogene expression.
Not available
S-EPMC10226260 | biostudies-literature
ProteomicsIntegrative analysis of multi-omics datasets for Synechocystis sp. PCC 6803 identifies novel elements in the salt acclimation process of cyanobacteria
The salt acclimation process of the euryhaline model cyanobacterium Synechocystis sp. PCC 6803 was analyzed by combining transcriptomic, proteomic and metabolomic methods. The comparison of salt-induced proteome and transcriptome changes revealed that most stably up-regulated proteins also showed el...
ORGANISM(S): Synechocystis sp. (strain PCC 6803 / Kazusa) 
2022-02-17 | PXD026118 | Pride
Hdmse Salt acclimation Label-free quantification Transcriptome-proteome correlation Synechocystis sp. pcc 6803 
ProteomicsAlterations in the CO2 availability induce alterations in the phospho-proteome of the cyanobacterium Synechocystis sp. PCC 6803
Cyanobacteria are the only prokaryotes that perform plant-like oxygenic photosynthesis. They evolved an inorganic carbon-concentrating mechanism to adapt to low CO2 conditions. Quantitative phospho-proteomics was applied to analyze regulatory features during the acclimation to low CO2 conditions in ...
ORGANISM(S): Synechocystis sp. PCC 6803 
2021-07-14 | PXD022283 | Pride
Carbon acclimation Mutant Cyanobacteria Phosphorylation Synechocystis sp. pcc 6803 Bicarbonate transport Protein kinase Spkc 
ProteomicsLabel-free quantitative proteomic analysis of DNA methyltransferase mutants of the cyanobacterium Synechocystis sp. PCC 6803 – Analysis of the membrane-enriched fraction
Total protein and membrane-enriched fractions of Synechocystis sp. PCC 6803 wild type (WT) and mutant strains affected with inactivated DNA methyltransferase genes were analyzed by LC-HDMSE. The mutation of the DNA methyltransferase gene sll0729 encoding M.Ssp6803II initially led to a strong phenoty...
ORGANISM(S): Synechocystis sp. (strain PCC 6803 / Kazusa) 
2019-06-26 | PXD012698 | Pride
Dna methyltransferase Hdmse Label-free quantification Suppressor mutants Synechocystis sp. pcc 6803 
ProteomicsLabel-free quantitative proteomic analysis of DNA methyltransferase mutants of the cyanobacterium Synechocystis sp. PCC 6803 – Analysis of total protein extracts
Total protein and membrane-enriched fractions of Synechocystis sp. PCC 6803 wild type (WT) and mutant strains affected with inactivated DNA methyltransferase genes were analyzed by LC-HDMSE. The mutation of the DNA methyltransferase gene sll0729 encoding M.Ssp6803II initially led to a strong phenoty...
ORGANISM(S): Synechocystis sp. (strain PCC 6803 / Kazusa) 
2019-06-26 | PXD012751 | Pride
Dna methyltransferase Hdmse Label-free quantification Suppressor mutants Synechocystis sp. pcc 6803 
ProteomicsThe role of serine/threonine-specific protein kinases in cyanobacteria - SpkB is involved in acclimation to fluctuating conditions in Synechocystis sp. PCC 6803
Protein phosphorylation via serine/threonine protein kinases (Spk) is a widespread mechanism to adjust cellular processes toward changing environmental conditions. To study their role(s) in cyanobacteria, we established a collection of 11 completely segregated spk mutants among the 12 annotated Spk’...
ORGANISM(S): Synechocystis sp. PCC 6803 
2024-01-26 | PXD040383 | Pride
Adaptation Cyanobacteria Kinases Phosphorylation Synechocystis sp. pcc6803 Spkb 
TranscriptomicsThe gene sml0013 of Synechocystis sp. strain PCC 6803 encodes for a novel subunit of the NDH1 complex that is ubiquitous distributed among cyanobacteria.
The NDH1 complex fulfils numerous tasks in the cyanobacterial cell such as respiration, cyclic electron flow, and inorganic carbon concentration. Despite the immense progress in our understanding of structure/function relation of the cyanobacterial NDH1 complex, the subunits catalysing the NAD(P)H d...
ORGANISM(S): Synechocystis sp. PCC 6803 
2013-06-29 | E-GEOD-48415 | biostudies-arrayexpress
UnknownIGF2BP1, a Conserved Regulator of RNA Turnover in Cancer.
Not available
S-EPMC8019740 | biostudies-literature
UnknownThe MicroRNA Landscape of MYCN-Amplified Neuroblastoma.
Not available
S-EPMC8138323 | biostudies-literature
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