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Unknown (1359)
Transcriptomics (88)
Proteomics (52)
Genomics (41)
Metabolomics (1)

Organisms

Homo sapiens (92)
Bombyx mori (51)
Onchocerca volvulus (51)
Klebsiella pneumoniae (51)
Musca domestica (51)
Brugia malayi (51)
Schizosaccharomyces pombe (51)
Streptomyces coelicolor A3(2) (51)
Sus scrofa (51)
Human immunodeficiency virus 1 (51)
Oryza sativa Indica Group (51)
Sinorhizobium meliloti BL225C (51)
Vitis (51)
Sus scrofa domesticus (51)
Ostreococcus tauri (51)
Saccharomyces cerevisiae (51)
Synechocystis sp. PCC 6803 (51)
Olavius algarvensis Gamma 1 endosymbiont (51)
Vitis vinifera (51)
Saccharopolyspora erythraea (51)
Staphylococcus aureus (51)
Mus musculus (19)
Gallus gallus (6)
Linum usitatissimum (2)
Coturnix japonica (2)
Anas platyrhynchos (2)
Metallosphaera sedula DSM 5348 (1)
Cichorium intybus (1)
Notophthalmus viridescens (1)
Triticum aestivum (1)

Organisms

freshwater metagenome (1)

Repository

biostudies-arrayexpress (99)
pride (51)
EGA (28)
ENA (2)
MetaboLights (1)
PAXDB (1)

Tissue

Cell culture (13)
Epithelial cell (4)
CD8-positive (3)
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Permanent cell line cell (3)
T cell (3)
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Liver (2)
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Blood (2)
CD4 positive T lymphocyte (1)
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Adult organism (1)
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Disease

None (1)
Interstitial lung disease (1)
Amyloidosis (1)
Thyroid cancer (1)
Bacterial infectious disease (1)
Inflammation (1)
Non-small cell lung carcinoma (1)
Colitis (1)
Osteosarcoma (1)
Breast cancer (1)
Disease free (1)
Acute leukemia (1)

Technology Type

Mass Spectrometry (51)
Shotgun proteomics (24)
Bottom-up proteomics (10)
Affinity purification coupled with mass spectrometry proteomics (9)
Data-dependent acquisition (6)
Data-independent acquisition (4)
Top-down proteomics (4)
Illumina HiSeq 2500 (ILLUMINA), AB SOLiD System (ABI_SOLID) (1)
Illumina HiSeq 2000, Illumina Genome Analyzer IIx (1)
Illumina OmniQuad 2.5 - CNVpartition (1)
Mass spectrometry (1)
Olink affinity proteomics (1)
Glycoproteomics (1)
Affinity proteomics (1)
MSE (1)
All-ion fragmentation (1)
HDMSE (1)
Gel-based experiment (1)

Instrument Platform

Illumina NovaSeq 6000 (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2013 (19)
2010 (17)
2015 (15)
2012 (14)
2016 (12)
2009 (9)
2023 (9)
2025 (8)
2026 (7)
2021 (7)
2024 (6)
2022 (5)
2014 (5)
2011 (5)
2017 (4)
2008 (3)
2020 (3)
2019 (2)
2007 (1)
2018 (1)

UNIPROT ID/AC

SPRTN_MOUSE (1)
BATF_MOUSE (1)
S35F2_MOUSE (1)
CCND2_MOUSE (1)
JAML_MOUSE (1)
I18RA_MOUSE (1)
CENPS_MOUSE (1)
DEFI8_MOUSE (1)
CF97D_MOUSE (1)
RNF4_MOUSE (1)
TM154_MOUSE (1)
TBRG1_MOUSE (1)
S18L2_MOUSE (1)
ARMC7_MOUSE (1)
TAF13_MOUSE (1)
ELK4_MOUSE (1)
ZBTB1_MOUSE (1)
MOT7_MOUSE (1)
LY65B_MOUSE (1)
GFI1_MOUSE (1)
ZDH15_MOUSE (1)
PRS40_MOUSE (1)
KLRA3_MOUSE (1)
LHPL4_MOUSE (1)
F10C1_MOUSE (1)
SKA2_MOUSE (1)
CD37_MOUSE (1)
CCR7_MOUSE (1)
KLRD1_MOUSE (1)
RA51B_MOUSE (1)

Metabolite Name

HISTIDINOL (1)
TYRAMINE (1)
3-4-DIHYDROXYBENZOATE (1)
CPD0-1274 (1)
CPD-633 (1)
3-HYDROXY-2-OXINDOLE-3-ACETYL-ASP (1)
CPD-16781 (1)
CPD-20010 (1)
DITHIOERYTHRITOL (1)
DITHIOTHREITOL (1)
URACIL (1)
CPD-603 (1)
ASN (1)
PHOSPHORYL-CHOLINE (1)
CPD0-1372 (1)
CPD-9501 (1)
CPD3O-4151 (1)
CPD-14650 (1)
BENZYL-ISOTHIOCYANATE (1)
CPD-65 (1)
CPD-7104 (1)
CPD-13027 (1)
TRP (1)
D-TRYPTOPHAN (1)
INDOLE_PYRUVATE (1)
CPD-9941 (1)
O-PHENANTHROLINE (1)
CPD-11845 (1)
CPD-8192 (1)
CPD-14666 (1)

First Public Date

2022 (1)
2016 (1)

Study type

Transcription profiling by array (65)
ChIP-seq (9)
ChIP-chip by tiling array (7)
RNA-seq of coding RNA (5)
Comparative genomic hybridization by array (4)
Genotyping by array (3)
Other (2)
Methylation profiling by high throughput sequencing (2)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2022 (144)
2021 (130)
2020 (116)
2025 (115)
2023 (105)
2015 (96)
2024 (93)
2019 (79)
2018 (76)
2017 (71)
2016 (70)
2014 (59)
2013 (59)
2012 (58)
2011 (46)
2010 (43)
2009 (38)
2008 (22)
2026 (10)
2006 (10)
2007 (8)
2005 (3)
2004 (3)
2003 (1)
2002 (1)
2001 (1)
1998 (1)

Lab affiliation

Max Perutz Labs, Vienna, Austria (4)
Division of Cell Signalling and Immunology, School of Life Sciences, University of Dundee, Dundee, UK (3)
La Trobe University, Melbourne, Australia (2)
University of Copenhagen Faculty of Health and Medical Sciences Department of Biomedical Sciences (2)
Department of Pathology, University of Cambridge, Cambridge, UK (1)
Institute of Metabolic Science, University of Cambridge, UK (1)
Center for Regenerative Medicine, Boston University and Boston Medical Center, Boston, MA 02118, USA The Pulmonary Center and Department of Medicine, Boston University School of Medicine, Boston, MA 02118, USA (1)
LIST_ERIN_ERTP Belvaux, LUXEMBOURG (1)
University of Michigan, 1600 Huron Parkway, NCRC Building 520, Rm1352, Ann Arbor, MI 48109-2800 (1)
Group Leader Department of Biochemistry and Metabolism John Innes Centre Norwich Research Park Norwich NR4 7UH, UK (1)
Executive Director Cancer Research, Peter MacCallum Cancer Centre. Head, The Sir Peter MacCallum Department of Oncology, The University of Melbourne. (1)
Assistant Professor, Department of Internal medicine, Morsani College of Medicine, University of South Florida (1)
Prof of Genetics Washington University in St. Louis (1)
Molecular Neuroendocrinology Research Group, Bristol Medical School: Translational Health Sciences, University of Bristol, Dorothy Hodgkin Building, Bristol, United Kingdom (1)
Assistant professor, Department of intenal medicine, divsion of infectious disease and international medicine, Morsani College of Medicine, University of South Florida (1)
Department of Internal Medicine, Division of Infectiuos Disease and Internal Medicine, Morsani College of Medicine (1)
La Trobe Institute for Molecular Science, Department of Biochemistry & Chemistry, La Trobe University, Melbourne, VIC, 3073, Australia. (1)
Assistant Professor, Gene Expression & Regulation Program, Wistar Institute Cancer Center, Philadelphia PA, USA (1)
Department of Physiology, Pharmacology & Neuroscience, University of Bristol, Bristol United Kingdom (1)
Wolfson Drug Discovery Unit Centre for Amyloidosis & Acute Phase Proteins Division of Medicine, Royal Free Campus University College London (1)
Biochemistry Department, Kavli Institute for Nanoscience Discovery, University of Oxford, UK (1)
Cancer Institute, University College London (1)
Manager, Biological Mass Spectrometry CORE (1)
Department of Biochemistry, University of Washington, Seattle, Washington 98195, USA Institute for Stem Cell and Regenerative Medicine, University of Washington, Seattle, Washington 98109, USA (1)
Program in Cell Biology Hospital For Sick Children, Toronto, SPARC BioCentre Hospital For Sick Children, Toronto, 8Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada (1)
Professor of Psychiatry and Neuroscience Icahn School of Medicine at Mount Sinai, New York, NY (1)
Department of Molecular Medicine Department of Chemistry The Scripps Research Institute (1)
British Antarctic Survey High Cross, Madingley Rd, Cambridge, CB3 0ET (1)
1Department of Biomedical Sciences, University of Copenhagen, Copenhagen, Denmark (1)
University of Copenhagen, Faculty of Health and Medical Sciences, Department of Biomedical Sciences (1)

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Gene expression profile of liver from adult and neonatal Balb/c mice after listeriosis

Expression profiling by microarray was used with a murine listeriosis model to better understand increased susceptibility of preterm neonates to infection. We used DNA microarray to identify genes that were differentially expressed in liver of adult and neonatal Balb/c mice after listeriosis infecti...

ORGANISM(S): Mus musculus

2013-06-01 | E-GEOD-45051 | biostudies-arrayexpress

Genome-wide Analysis of Chromatin Interactions in Human Cells

Millions of cis-regulatory sequences have recently been found in the human genome, but the function of most cis-elements are not yet clear, in part due to the difficulty in determining their regulatory targets, which are often located millions of base pairs away and separated by one or more unrelate...

ORGANISM(S): Homo sapiens

2013-10-20 | E-GEOD-43070 | biostudies-arrayexpress

Conserved Topological Domains in Mammalian Genomes Identified by High-resolution Analysis of Chromatin Interactions

The spatial organization of the genome is intimately linked to its biological function, yet our understanding of higher order genomic structure is limited. Here we present high-resolution analyses of chromosomal organization in pluripotent and differentiated human and murine cell types determined u...

ORGANISM(S): Mus musculus

2012-04-10 | E-GEOD-35156 | biostudies-arrayexpress

Protein kinase C-ζ mediates lung injury induced by diesel exhaust particles.

Not available

S-EPMC3604088 | biostudies-literature

Chlamydia buteonis in birds of prey presented to California wildlife rehabilitation facilities.

Not available

S-EPMC8513822 | biostudies-literature

Building C(sp³)-rich complexity by combining cycloaddition and C-C cross-coupling reactions.

Not available

S-EPMC6126906 | biostudies-literature

T cell acute leukaemia development and chemo-resistance are mediated by dynamic interactions with heterogeneous bone marrow microenvironments.

It is widely accepted that complex interactions between cancer cells and their surrounding microenvironment contribute to disease development, chemo-resistance and disease relapse. In light of this observed interdependency, novel therapeutic interventions that target specific cancer stroma cell line...

ORGANISM(S): Homo sapiens

2016-07-01 | E-MTAB-4889 | biostudies-arrayexpress

Effect of primer selection on estimates of GB virus C (GBV-C) prevalence and response to antiretroviral therapy for optimal testing for GBV-C viremia.

Not available

S-EPMC1594694 | biostudies-literature

An 85-aa segment of the GB virus type C NS5A phosphoprotein inhibits HIV-1 replication in CD4+ Jurkat T cells.

Not available

S-EPMC1622863 | biostudies-literature

A draft map of cis-regulatory sequences in the mouse genome [HiC]

As the most widely used mammalian model organism, mice play a critical role in biomedical research for mechanistic study of human development and diseases. Today, functional sequences in the mouse genome are still poorly annotated a decade after its initial sequencing. We report here a map of nearly...

ORGANISM(S): Mus musculus

2012-06-30 | E-GEOD-34587 | biostudies-arrayexpress

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1541 Results

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